RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 FOXL1Q12952 345 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 PDPNQ86YL7 162 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 C1orf210Q8IVY1 113 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 LEAP2Q969E1 77 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 CALYQ9NYX4 217 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 SH3BGRL2Q9UJC5 107 aa10.68□□□□□ -0.7
DNMT3A-202ENST00000321117 IFNL4K9M1U5 179 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 Q6P435 159 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 HARBI1Q96MB7 349 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 SCRT1Q9BWW7 348 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 TBL2Q9Y4P3 447 aaKnown RBP10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 GPR179Q6PRD1 2367 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 SCGB2A2Q13296 93 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 VMA21Q3ZAQ7 101 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 ZADH2Q8N4Q0 377 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 RND1Q92730 232 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 USF3Q68DE3 2245 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 EREGO14944 169 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 PSPNO60542 156 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 AMY1AP04745 511 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 HIST1H1EP10412 219 aaKnown RBP10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 ZFP36L1Q07352 338 aaKnown RBP10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 ZNF146Q15072 292 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 SFXN3Q9BWM7 321 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 CA2P00918 260 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 IGKV1D-33P01593 117 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 IGKV1-33P01594 117 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 HINT1P49773 126 aaPredicted RBP10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
DNMT3A-202ENST00000321117 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 TOX4O94842 621 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 TFF1P04155 84 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 TIMP3P35625 211 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 BHLHA15Q7RTS1 189 aaPredicted RBP10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 OR1L8Q8NGR8 309 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 MRPL37Q9BZE1 423 aaKnown RBP10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 SPTBN2O15020 2390 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 SCGB2A1O75556 95 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 C8orf88P0DMB2 117 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 CT45A10P0DMU9 189 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 ATOH7Q8N100 152 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 SAP30LQ9HAJ7 183 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 FREM1Q5H8C1 2179 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 ISLRO14498 428 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 LINC00869P0C866 280 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 IGFBP2P18065 325 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 VSTM2AQ8TAG5 236 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 DCAF16Q9NXF7 216 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 CRIM1Q9NZV1 1036 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 RNF7Q9UBF6 113 aa10.66□□□□□ -0.7
DNMT3A-202ENST00000321117 SPTA1P02549 2419 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 IFITM10A6NMD0 228 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 TNFRSF1AP19438 455 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 TMEM191AQ9H0A3 160 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 ELOVL5Q9NYP7 299 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 A0A1W2PN81 502 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 CD33P20138 364 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 CHRNB4P30926 498 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 Q0VFX4 171 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 CRIP3Q6Q6R5 217 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 GCSAMQ8N6F7 178 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 Q8NFD4 153 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 RBM14Q96PK6 669 aaKnown RBP10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 DPRXA6NFQ7 191 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 CNIH1O95406 144 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 HES3Q5TGS1 186 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 SMIM15Q7Z3B0 74 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
DNMT3A-202ENST00000321117 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 TMPRSS2O15393 492 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 EAF1Q96JC9 268 aaPredicted RBP10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 GGTLC1Q9BX51 225 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 P01737 135 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 HTR1DP28221 377 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 C19orf35Q6ZS72 473 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 APC2O95996 2303 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 TNFSF13O75888 250 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 DKK1O94907 266 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF596Q8TC21 504 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms