RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ETFRF1Q6IPR1 90 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 HELTA6NFD8 242 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 EFNB3Q15768 340 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
COL6A2-202ENST00000310645 CTRLP40313 264 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 MAGEA5P43359 124 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 RPP30P78346 268 aaKnown RBP12.18□□□□□ -0.46
COL6A2-202ENST00000310645 PSG5Q15238 335 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 Q8IYB0 196 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 GMPPAQ96IJ6 420 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-202ENST00000310645 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 FOXF2Q12947 444 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 Q6ZR03 302 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 STPG3Q8N7X2 389 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 TNCP24821 2201 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 IGKV3D-15A0A087WSY6 115 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 CFIP05156 583 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 ZNF146Q15072 292 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 OR1C1Q15619 314 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 SAP25Q8TEE9 199 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 FAM122AQ96E09 287 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
COL6A2-202ENST00000310645 BOKQ9UMX3 212 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-202ENST00000310645 ZNF324O75467 553 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-202ENST00000310645 GPR12P47775 334 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 RHOBP62745 196 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 MIR17HGQ75NE6 70 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 HSD17B10Q99714 261 aaKnown RBP12.17□□□□□ -0.46
COL6A2-202ENST00000310645 SFXN3Q9BWM7 321 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 SSBP3Q9BWW4 388 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-202ENST00000310645 LOXL2Q9Y4K0 774 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 M0R1X1 148 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 CLDN18P56856 261 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 Q56UQ5 140 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 PPP1R32Q7Z5V6 425 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 COQ2Q96H96 371 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 GNG12Q9UBI6 72 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 MPDU1O75352 247 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 MT-CO2P00403 227 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 OR10J4P0C629 311 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 EIF4EBP1Q13541 118 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-202ENST00000310645 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 C22orf15Q8WYQ4 148 aa12.17□□□□□ -0.46
COL6A2-202ENST00000310645 RPL19P84098 196 aaKnown RBP12.16□□□□□ -0.46
COL6A2-202ENST00000310645 TIGITQ495A1 244 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 DCAF12Q5T6F0 453 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 MRPS17Q9Y2R5 130 aaKnown RBP12.16□□□□□ -0.46
COL6A2-202ENST00000310645 TRAV9-1A0A075B6T8 112 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 BMPR1BO00238 502 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 OR7C2O60412 319 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 GATA2P23769 480 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-202ENST00000310645 CEACAM8P31997 349 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-202ENST00000310645 PRRX1P54821 245 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 RPL39P5Q59GN2 51 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 NIT1Q86X76 327 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 SLC25A40Q8TBP6 338 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 RNF24Q9Y225 148 aa12.16□□□□□ -0.46
COL6A2-202ENST00000310645 AHRRA9YTQ3 701 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 CA2P00918 260 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 CYC1P08574 325 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 ERVK-16P61578 105 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 STUMQ69YW2 141 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 GCNT2Q8N0V5 402 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TSKUQ8WUA8 353 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 GFRA3O60609 400 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 IGFBP2P18065 325 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TSPOP30536 169 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 RBX1P62877 108 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 CX3CL1P78423 397 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 PLGLB1Q02325 96 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TET2Q6N021 2002 aaPredicted RBP12.15□□□□□ -0.46
COL6A2-202ENST00000310645 WDR73Q6P4I2 378 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 BET1LQ9NYM9 111 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TP73-AS1Q9UF72 201 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 LINC00696Q6ZRV3 163 aa12.15□□□□□ -0.46
COL6A2-202ENST00000310645 RELBQ01201 579 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 LYSMD4Q5XG99 296 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF738Q8NE65 137 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 CDC42EP3Q9UKI2 254 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 DMDP11532 3685 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms