RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 VAMP8Q9BV40 100 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 PARD6GQ9BYG4 376 aaPredicted RBP10.53□□□□□ -0.72
VANGL1-201ENST00000310260 MSL2Q9HCI7 577 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 CCL28Q9NRJ3 127 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 MLNRO43193 412 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 SLC25A6P12236 298 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 CHRNA7P36544 502 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 Q6ZS49 121 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 C22orf15Q8WYQ4 148 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 SLC25A22Q9H936 323 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 SLC39A9Q9NUM3 307 aa10.53□□□□□ -0.72
VANGL1-201ENST00000310260 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 ASH1LQ9NR48 2969 aaKnown RBP10.52□□□□□ -0.73
VANGL1-201ENST00000310260 UBE2L5PA0A1B0GUS4 154 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 HMGB3O15347 200 aaKnown RBP10.52□□□□□ -0.73
VANGL1-201ENST00000310260 TUSC2O75896 110 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 IAPPP10997 89 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 ADMP35318 185 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 RPP30P78346 268 aaKnown RBP10.52□□□□□ -0.73
VANGL1-201ENST00000310260 OR56B2PQ8NGI1 322 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 DYNLRB1Q9NP97 96 aa10.52□□□□□ -0.73
VANGL1-201ENST00000310260 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 CD300LBA8K4G0 201 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 SCTP09683 121 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 RAC2P15153 192 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 TPPP2P59282 170 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 SELENOTP62341 195 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 HBG1P69891 147 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 HBG2P69892 147 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 ACSM6Q6P461 480 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 Q6ZRM9 215 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 OR4C12Q96R67 309 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 SPRY3O43610 288 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 OR7C1O76099 320 aaPredicted RBP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 NDUFB8O95169 186 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 WNT2P09544 360 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 ESDP10768 282 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 CD99P14209 185 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 CA6P23280 308 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 MBNL2Q5VZF2 373 aaKnown RBP10.51□□□□□ -0.73
VANGL1-201ENST00000310260 TMEM42Q69YG0 159 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 TCF23Q7RTU1 214 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 LINC01551Q86U37 167 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 OR10V1Q8NGI7 309 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 PSENENQ9NZ42 101 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 NAV2Q8IVL1 2488 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 CSMD2Q7Z408 3487 aa10.51□□□□□ -0.73
VANGL1-201ENST00000310260 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 SYNGR2O43760 224 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 NPPCP23582 126 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 F2RP25116 425 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 ZNF611Q8N823 705 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 VN1R17PQ8TDU5 208 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 PIGCQ92535 297 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 NEIL1Q96FI4 390 aaPredicted RBP10.5□□□□□ -0.73
VANGL1-201ENST00000310260 HSPB9Q9BQS6 159 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 CACNG5Q9UF02 275 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 DSCAMO60469 2012 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 IGKV1-6A0A0C4DH72 117 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 CTXND1A0A1B0GTU2 59 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 BATF2Q8N1L9 274 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 OR5T1Q8NG75 326 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 OR2Z1Q8NG97 314 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 CCL19Q99731 98 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
VANGL1-201ENST00000310260 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 B9A039 149 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 J3QW42 95 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 CCL25O15444 150 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 NAPSAO96009 420 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 NRASP01111 189 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 IGHV3-13P01766 116 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
VANGL1-201ENST00000310260 FOXL1Q12952 345 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 C1orf174Q8IYL3 243 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 STPG4Q8N801 248 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 DOCK11Q5JSL3 2073 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 C20orf202A1L168 122 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 ANKRD30BLA7E2S9 258 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 SERF1AO75920 110 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 GOSR1O95249 250 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 PSG2P11465 335 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 CCL8P80075 99 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 OR51H1Q8NH63 302 aa10.49□□□□□ -0.73
VANGL1-201ENST00000310260 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms