RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SEC11CQ9BY50 192 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 NKX6-2Q9C056 277 aaPredicted RBP5.97□□□□□ -1.45
RAG1-201ENST00000299440 G6PC2Q9NQR9 355 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 OPN4Q9UHM6 478 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 DOCK6Q96HP0 2047 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 TRAV14DV4A0A0A6YYC5 116 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 GCM2O75603 506 aaPredicted RBP5.97□□□□□ -1.45
RAG1-201ENST00000299440 WDR82Q6UXN9 313 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 COMMD1Q8N668 190 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 OSR1Q8TAX0 266 aaPredicted RBP5.97□□□□□ -1.45
RAG1-201ENST00000299440 A0A1B0GVG6 124 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 IFI6P09912 130 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 GPR146Q96CH1 333 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 C1QTNF5Q9BXJ0 243 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 REG4Q9BYZ8 158 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 SIRT4Q9Y6E7 314 aaPredicted RBP5.97□□□□□ -1.45
RAG1-201ENST00000299440 KIF13BQ9NQT8 1826 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 COL4A6Q14031 1691 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 NDUFS8O00217 210 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 ICMTO60725 284 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 EIF3GO75821 320 aaKnown RBP eCLIP5.97□□□□□ -1.45
RAG1-201ENST00000299440 WISP3O95389 354 aaPredicted RBP5.97□□□□□ -1.45
RAG1-201ENST00000299440 TDGF1P13385 188 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 SELLP14151 372 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 MALP21145 153 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
RAG1-201ENST00000299440 ZNF146Q15072 292 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 PSMG4Q5JS54 123 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 MUC21Q5SSG8 566 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 CLDND2Q8NHS1 167 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 MRAP2Q96G30 205 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 OR10C1Q96KK4 312 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 TOMM7Q9P0U1 55 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 BDP1A6H8Y1 2624 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 MIA3Q5JRA6 1907 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 RUNX1Q01196 453 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 GLRX5Q86SX6 157 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 TCEAL7Q9BRU2 100 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 GSX2Q9BZM3 304 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 OR51M1Q9H341 326 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
RAG1-201ENST00000299440 MBD3L4A6NDZ8 208 aaPredicted RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 MBD3L3A6NE82 208 aaPredicted RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 MBD3L5A6NJ08 208 aaPredicted RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 CRYGSP22914 178 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 ICAM4Q14773 271 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 ZNF474Q6S9Z5 364 aaPredicted RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 TCTEX1D1Q8N7M0 179 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 MBD3L2Q8NHZ7 208 aaPredicted RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 Q96M66 194 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 LOC285556D6RIA3 1793 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 DPRXA6NFQ7 191 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 C5orf52A6NGY3 159 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 M0R2Z0 102 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 FSTP19883 344 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 TAS2R60P59551 318 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 HIST3H3Q16695 136 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 TEX38Q6PEX7 206 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 ZNF818PQ6ZRF7 136 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 LINC00305Q7Z4B0 112 aa5.96□□□□□ -1.45
RAG1-201ENST00000299440 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.45
RAG1-201ENST00000299440 PMS2P11Q13670 270 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 OR5AN1Q8NGI8 311 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 RNF166Q96A37 237 aaPredicted RBP5.96□□□□□ -1.46
RAG1-201ENST00000299440 MMP26Q9NRE1 261 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 SAA2-SAA4A0A096LPE2 208 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 E7EQL1 145 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 SAA2P0DJI9 122 aaPredicted RBP5.96□□□□□ -1.46
RAG1-201ENST00000299440 CKS2P33552 79 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 ANGPTL6Q8NI99 470 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 AICDAQ9GZX7 198 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 PSPNO60542 156 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 NUDT3O95989 172 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 F12P00748 615 aaPredicted RBP5.96□□□□□ -1.46
RAG1-201ENST00000299440 MBNL2Q5VZF2 373 aaKnown RBP5.96□□□□□ -1.46
RAG1-201ENST00000299440 ASPHD2Q6ICH7 369 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 FLVCR1-AS1Q8TAF5 88 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
RAG1-201ENST00000299440 ASB13Q8WXK3 278 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 ZMAT4Q9H898 229 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 A0A0G2JMZ2 1700 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 LRRC37A2A6NM11 1700 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 CTXND1A0A1B0GTU2 59 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 TMEM178BH3BS89 294 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 FOSL1P15407 271 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 ARL6IP6Q8N6S5 226 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 OR13C6PQ8NH95 151 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 TMEM222Q9H0R3 208 aa5.96□□□□□ -1.46
RAG1-201ENST00000299440 IGHV2-26A0A0B4J1V2 119 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 LINC00271P0C7V0 271 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 SPNP16150 400 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 FXYD7P58549 80 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 HLA-DRB5Q30154 266 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 WDR73Q6P4I2 378 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 FAM90A1Q86YD7 464 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 FGFBP3Q8TAT2 258 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 DUXBA0A1W2PPF3 345 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 PRB4P10163 310 aaPredicted RBP5.95□□□□□ -1.46
RAG1-201ENST00000299440 ASIPP42127 132 aa5.95□□□□□ -1.46
RAG1-201ENST00000299440 BSXQ3C1V8 233 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms