RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 TRA2AQ13595 282 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■□□□□ 11.2
TNFRSF21-201ENST00000296861 MLANAQ16655 118 aa11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 Q8IYB0 196 aa11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 MRPL18Q9H0U6 180 aaKnown RBP11.11□□□□□ -0.63
TNFRSF21-201ENST00000296861 ZNF253O75346 499 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 HPRT1P00492 218 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 TMEM11P17152 192 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 OR10J1P30954 320 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 HLA-DRB5Q30154 266 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 B4E171 279 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 PRDX2P32119 198 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 FOXF2Q12947 444 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 Q6ZR03 302 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 CISD2Q8N5K1 135 aaKnown RBP11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 OR5G3P0C626 314 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 TCTAP57738 103 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 ZNF718Q3SXZ3 478 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 TANC2Q9HCD6 1990 aa11.1□□□□□ -0.63
TNFRSF21-201ENST00000296861 CEP295Q9C0D2 2601 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 IGHV1-2P23083 117 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 TPPP2P59282 170 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 COTL1Q14019 142 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 ATP6V1FQ16864 119 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 COQ2Q96H96 371 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 PKIBQ9C010 78 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 OPN3Q9H1Y3 402 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 HSPB7Q9UBY9 170 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 NKX2-8O15522 239 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 IGFBP2P18065 325 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 GNG4P50150 75 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 ZGRF1Q86YA3 2104 aa11.09□□□□□ -0.63
TNFRSF21-201ENST00000296861 A0A1B0GWJ7 208 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 NTN3O00634 580 aaPredicted RBP11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 ENSAO43768 121 aaKnown RBP11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 TIMP3P35625 211 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 TIGITQ495A1 244 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 BLNKQ8WV28 456 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 SPRR3Q9UBC9 169 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.63
TNFRSF21-201ENST00000296861 COL4A2P08572 1712 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 DMXL2Q8TDJ6 3036 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 CDKN1AP38936 164 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 MLNRO43193 412 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 IRF2P14316 349 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 ZNF439Q8NDP4 499 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 TMEM45BQ96B21 275 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 NCKAP5O14513 1909 aa11.08□□□□□ -0.64
TNFRSF21-201ENST00000296861 NPY1RP25929 384 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 GBGT1Q8N5D6 347 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 TCF19Q9Y242 345 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 CREBBPQ92793 2442 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 LNP1A1A4G5 178 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 MT-CO2P00403 227 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 SRP14P37108 136 aaKnown RBP11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 STPG3Q8N7X2 389 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 FER1L6-AS2Q96M78 137 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 C15orf62A8K5M9 175 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 UTF1Q5T230 341 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 LINC00470Q9BZP3 86 aa11.07□□□□□ -0.64
TNFRSF21-201ENST00000296861 A0A1W2PRD5 423 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 A0A1W2PRF3 423 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 A0A1W2PRM7 423 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 HELTA6NFD8 242 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 TCF21O43680 179 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 PDE6DO43924 150 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 Q6ZSR3 168 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 MMD2Q8IY49 270 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 ZNF586Q9NXT0 402 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 YTHDF2Q9Y5A9 579 aaKnown RBP11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 ACTL10Q5JWF8 245 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 ACP7Q6ZNF0 438 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 LINC00596Q86U02 117 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 TMEM178AQ8NBL3 297 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 NEU1Q99519 415 aa11.06□□□□□ -0.64
TNFRSF21-201ENST00000296861 CXXC4Q9H2H0 198 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms