RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 FXYD4P59646 89 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 HERV-K104P61576 105 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 KLK9Q2XQG4 91 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 GPHA2Q96T91 129 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 SRSF8Q9BRL6 282 aaKnown RBP13.1□□□□□ -0.31
TFF3-201ENST00000291525 COMMD5Q9GZQ3 224 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 THYN1Q9P016 225 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 A0A1B0GW64 132 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 A8MWP6 167 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 SULT1C2O00338 296 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 FGF2P09038 288 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 CD7P09564 240 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 PTHLHP12272 177 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 CBLN1P23435 193 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 NEDD8Q15843 81 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 POU2AF1Q16633 256 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
TFF3-201ENST00000291525 THOC7Q6I9Y2 204 aaKnown RBP13.09□□□□□ -0.31
TFF3-201ENST00000291525 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
TFF3-201ENST00000291525 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 DMBX1Q8NFW5 382 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 GIMAP1Q8WWP7 306 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 HIPK2Q9H2X6 1198 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 RNF167Q9H6Y7 350 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
TFF3-201ENST00000291525 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 REG1AP05451 166 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 ERVK-16P61578 105 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 AADACL3Q5VUY0 350 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 DEFB125Q8N687 156 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 OR51H1Q8NH63 302 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
TFF3-201ENST00000291525 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 COMMD9Q9P000 198 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 S4R3C0 116 aa13.08□□□□□ -0.32
TFF3-201ENST00000291525 UPK2O00526 184 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 XRCC3O43542 346 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 OR2B8PP59922 312 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 ZNF818PQ6ZRF7 136 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 HSD17B13Q7Z5P4 300 aaPredicted RBP13.07□□□□□ -0.32
TFF3-201ENST00000291525 MARC2Q969Z3 335 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 S100A16Q96FQ6 103 aaKnown RBP13.07□□□□□ -0.32
TFF3-201ENST00000291525 QTRT1Q9BXR0 403 aaKnown RBP13.07□□□□□ -0.32
TFF3-201ENST00000291525 RETNQ9HD89 108 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 TMEM140Q9NV12 185 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 EHFQ9NZC4 300 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 TENM2Q9NT68 2774 aa13.07□□□□□ -0.32
TFF3-201ENST00000291525 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 CLEC3BP05452 202 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 FCER2P06734 321 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 MYOD1P15172 320 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 UBE2NLQ5JXB2 153 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 UXS1Q8NBZ7 420 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 OR52B4Q8NGK2 314 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 CACNG8Q8WXS5 425 aa13.06□□□□□ -0.32
TFF3-201ENST00000291525 IGLC7A0M8Q6 106 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
TFF3-201ENST00000291525 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
TFF3-201ENST00000291525 MFSD2BA6NFX1 497 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 CGB1A6NKQ9 187 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
TFF3-201ENST00000291525 EDN2P20800 178 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 PLET1Q6UQ28 207 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 WFDC10AQ9H1F0 79 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 UFC1Q9Y3C8 167 aa13.05□□□□□ -0.32
TFF3-201ENST00000291525 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
TFF3-201ENST00000291525 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 MEIS3P1A6NDR6 274 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 JTBO76095 146 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 S1PR2O95136 353 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 PTBP1P26599 531 aaKnown RBP eCLIP13.04□□□□□ -0.32
TFF3-201ENST00000291525 GPR183P32249 361 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
TFF3-201ENST00000291525 TAS2R46P59540 309 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 TSPAN14Q8NG11 270 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 VN1R17PQ8TDU5 208 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 VCX3AQ9NNX9 186 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
TFF3-201ENST00000291525 MLXQ9UH92 298 aa13.04□□□□□ -0.32
TFF3-201ENST00000291525 TRAV3A0A0B4J244 114 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 F2RP25116 425 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 DHRS11Q6UWP2 260 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms