RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TRBV5-7A0A0A0MS05 114 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 PPIFP30405 207 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 TMPRSS3P57727 454 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 TMEM74BQ9NUR3 256 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 Q96M66 194 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 SFTPCP11686 197 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 MC5RP33032 325 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 SCGB3A1Q96QR1 104 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 FBXL15Q9H469 300 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 MRPS16Q9Y3D3 137 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 CEACAM4O75871 244 aa14.27□□□□□ -0.12
TSPAN3-201ENST00000267970 NHP2Q9NX24 153 aaKnown RBP14.27□□□□□ -0.12
TSPAN3-201ENST00000267970 CD24P25063 80 aa14.27□□□□□ -0.12
TSPAN3-201ENST00000267970 MIR17HGQ75NE6 70 aa14.27□□□□□ -0.12
TSPAN3-201ENST00000267970 LOC105371267A0A1B0GV96 52 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 NPPCP23582 126 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 EFNB1P98172 346 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 LDLRAD2Q5SZI1 272 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 C10orf128Q5T292 105 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 RCC1LQ96I51 464 aaKnown RBP14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 NPCDR1Q9BY65 106 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 PTPRZ1P23471 2315 aaPredicted RBP14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 IGKV1D-42A0A075B6H8 117 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 PEX7O00628 323 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 EVI2AP22794 236 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 TTC9CQ8N5M4 171 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 ICE1Q9Y2F5 2266 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 TNFSF10P50591 281 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 CYP2G1PQ6ZSU1 146 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 GATAD1Q8WUU5 269 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 SMDT1Q9H4I9 107 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 MYO16Q9Y6X6 1858 aa14.27□□□□□ -0.13
TSPAN3-201ENST00000267970 A0A087WV48 116 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 CELA3AP09093 270 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 LOC105371242A0A075B767 164 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 IGKV1D-43A0A0B4J1Z2 117 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 CD69Q07108 199 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 ZNF831Q5JPB2 1677 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 LAIR2Q6ISS4 152 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 SELENOTP62341 195 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 PGPEP1LA6NFU8 196 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 TEX29Q8N6K0 151 aa14.26□□□□□ -0.13
TSPAN3-201ENST00000267970 CD1AP06126 327 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 ADMP35318 185 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 UCP3P55916 312 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 NPDC1Q9NQX5 325 aaPredicted RBP14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 TIAF1O95411 115 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 TMEM50AO95807 157 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 IGHV3-11P01762 117 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 WISP3O95389 354 aaPredicted RBP14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 FAM106AQ4KMX7 169 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 JMJD8Q96S16 334 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 SDHCQ99643 169 aaPredicted RBP14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 ZNF658BQ4V348 819 aaPredicted RBP14.25□□□□□ -0.13
TSPAN3-201ENST00000267970 TRGV3P03979 118 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 CD55P08174 381 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 SRD5A1P18405 259 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 LEPP41159 167 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 PILRAQ9UKJ1 303 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 AICDAQ9GZX7 198 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 SLC25A45Q8N413 288 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 UNC13CQ8NB66 2214 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 CLEC19AQ6UXS0 136 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 TXNDC17Q9BRA2 123 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 GPR183P32249 361 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 SMIM8Q96KF7 97 aa14.24□□□□□ -0.13
TSPAN3-201ENST00000267970 RFPL3SP0C7P2 107 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 PAX2Q02962 417 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 WDYHV1Q96HA8 205 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 ELOVL5Q9NYP7 299 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 TNFRSF18Q9Y5U5 241 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 DUX3Q96PT4 197 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 TMEM106BQ9NUM4 274 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 FBLN7Q53RD9 439 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 C1orf100Q5SVJ3 147 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 SCARF2Q96GP6 870 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 ZNF318Q5VUA4 2279 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 FXYD7P58549 80 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 IL36BQ9NZH7 164 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 SYNGR3O43761 229 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 IGKV1D-33P01593 117 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 IGKV1-33P01594 117 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 COX6B1P14854 86 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 TBR1Q16650 682 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 DUSP15Q9H1R2 295 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-201ENST00000267970 LOC390937A0A1W2PQ73 354 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 NPIPB11E5RHQ5 1161 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 SERF1AO75920 110 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 PDLIM4P50479 330 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 EGR4Q05215 589 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 EEF1AKMT3Q96AZ1 226 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 ARHGEF17Q96PE2 2063 aaPredicted RBP14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 ATP5J2P56134 94 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 IGHV1-69-2A0A0G2JMI3 117 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms