RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 PLP1P60201 277 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 CNTRLQ7Z7A1 2325 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 TRAV24A0A0B4J272 114 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 H0YL77 283 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 RRHO14718 337 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 FAM216BQ8N7L0 139 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 FOLR2P14207 255 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 C11orf44Q8N8P7 122 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 IGHV2OR16-5A0A0B4J2B6 119 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 A0A1W2PR77 199 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 GCHFRP30047 84 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 GDF15Q99988 308 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 TM4SF5O14894 197 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 IGHV1-2P23083 117 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 WFDC6Q9BQY6 131 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 OR1P1Q8NH06 330 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 SFRP2Q96HF1 295 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 RBM38Q9H0Z9 239 aaKnown RBP11.22□□□□□ -0.61
COL1A1-201ENST00000225964 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 SCN2AQ99250 2005 aa11.22□□□□□ -0.61
COL1A1-201ENST00000225964 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-201ENST00000225964 TMEM187Q14656 261 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 VGLL1Q99990 258 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 HLA-DQB1P01920 261 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 FAM131CQ96AQ9 280 aa11.21□□□□□ -0.61
COL1A1-201ENST00000225964 ALX4Q9H161 411 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-201ENST00000225964 TRBV5-7A0A0A0MS05 114 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 SMIM6P0DI80 62 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 PMCHL1Q16048 86 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.62
COL1A1-201ENST00000225964 SMIM10Q96HG1 83 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 IGKV1D-42A0A075B6H8 117 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF250P15622 560 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 NPFFR1Q9GZQ6 430 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 GP6Q9HCN6 339 aa11.21□□□□□ -0.62
COL1A1-201ENST00000225964 H3BRM9 83 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 AGAP20933 346 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 MRPL20Q9BYC9 149 aaKnown RBP11.2□□□□□ -0.62
COL1A1-201ENST00000225964 C21orf62Q9NYP8 219 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 NPIPB9F8W1W9 429 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 KLF4O43474 513 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 NPIPB7O75200 414 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 NUDT10Q8NFP7 164 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 NUDT11Q96G61 164 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 C5orf66Q9H5L9 145 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 COL5A3P25940 1745 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-201ENST00000225964 PRSS22Q9GZN4 317 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 CBLN4Q9NTU7 201 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 CHCHD2Q9Y6H1 151 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-201ENST00000225964 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 PRELID3AQ96N28 172 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 PDCD11Q14690 1871 aaKnown RBP11.2□□□□□ -0.62
COL1A1-201ENST00000225964 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
COL1A1-201ENST00000225964 CELA3BP08861 270 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 TMEM105Q8N8V8 129 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 PEX7O00628 323 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 HBBP68871 147 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF883P0CG24 379 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 C9orf106Q8NAJ2 232 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 C7orf66A4D0T2 115 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 WISP3O95389 354 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 IGFBP2P18065 325 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 LEPP41159 167 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 WFIKKN1Q96NZ8 548 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 SCGB3A1Q96QR1 104 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 LINC00862A6NCI5 91 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 CNTFRP26992 372 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms