RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ENY2Q9NPA8 101 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 KIAA1456Q9P272 454 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 WASHC3Q9Y3C0 194 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 TEX50A0A1B0GTY4 177 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 HBE1P02100 147 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 PRCDQ00LT1 54 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 ACSM6Q6P461 480 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 HINT2Q9BX68 163 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 NPCDR1Q9BY65 106 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 A6NNC1 897 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 LIPFP07098 398 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 CD1BP29016 333 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 RAB11AP62491 216 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 SSX7Q7RTT5 188 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 SLC24A4Q8NFF2 622 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 RARRES2Q99969 163 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 GGACTQ9BVM4 153 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 FKBP11Q9NYL4 201 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.17
RABGGTA-201ENST00000216840 ARHGAP32A7KAX9 2087 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 RBFOX3A6NFN3 312 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 NDUFS7O75251 213 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 IGLV2-23P01705 113 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 OPN1MWP04001 364 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 NPY1RP25929 384 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 RAB2AP61019 212 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 BEND2Q8NDZ0 799 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 PLEKHA3Q9HB20 300 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 ONECUT1Q9UBC0 465 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 CFAP46Q8IYW2 2715 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 IGKV1D-33P01593 117 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 IGKV1-33P01594 117 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 MC5RP33032 325 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 RAB13P51153 203 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 DLK1P80370 383 aa13.95□□□□□ -0.18
RABGGTA-201ENST00000216840 hCG_1809904A0A1W2PP81 198 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 A0A1W2PPE2 198 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 A0A1W2PR64 198 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 A0A1W2PRV1 198 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 CA2P00918 260 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 IFNA4P05014 189 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 COX7A1P24310 79 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 Q8N7P7 452 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 OR5B3Q8NH48 314 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 TMEM167AQ8TBQ9 72 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 SSBP3Q9BWW4 388 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 SMDT1Q9H4I9 107 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 KPTNQ9Y664 436 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 DNASE2O00115 360 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 SNAPINO95295 136 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 USF1P22415 310 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 GPR6P46095 362 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 HAGHQ16775 308 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 RPP25LQ8N5L8 163 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 ZNF709Q8N972 641 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 OR4A5Q8NH83 315 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 CLDND2Q8NHS1 167 aa13.94□□□□□ -0.18
RABGGTA-201ENST00000216840 SMCO3A2RU48 225 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 C17orf112F2Z3M2 114 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 NPBWR1P48145 328 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 ZNF787Q6DD87 383 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 TREML4Q6UXN2 200 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 PNKDQ8N490 385 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 OR4P4Q8NGL7 312 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 VSTM2AQ8TAG5 236 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 RITA1Q96K30 269 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 SLC35B3Q9H1N7 401 aa13.93□□□□□ -0.18
RABGGTA-201ENST00000216840 LOC105371242A0A075B767 164 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 IGHV3-72A0A0B4J1Y9 119 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 FAM74A7A6NL05 159 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 MBP02144 154 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 FAM74A3Q4VXF1 159 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 ZNF506Q5JVG8 444 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 NDUFA4L2Q9NRX3 87 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 NUPL2O15504 423 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 EFNA4P52798 201 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 FGF8P55075 233 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 ARF6P62330 175 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 ICAM4Q14773 271 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 COMMD5Q9GZQ3 224 aa13.92□□□□□ -0.18
RABGGTA-201ENST00000216840 IGHV1-3A0A0C4DH29 117 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 MAP1LC3B2A6NCE7 125 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 LY6LH3BQJ8 138 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 ENSAO43768 121 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 MPDU1O75352 247 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 OR10W1Q8NGF6 305 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 OR10G7Q8NGN6 311 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 OR1L8Q8NGR8 309 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 MAP1LC3BQ9GZQ8 125 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms