RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm20852Q5M8R5 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Tle1Q62440 770 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20917Q62457 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20809Q62458 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20865Q62460 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Zfp874bQ7M6X2 447 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr504Q7TRU7 318 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20738Q810R8 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Tusc5Q8C838 173 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 FuomQ8R2K1 153 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cdc42ep3Q9CQC5 254 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20806Q9D9T3 227 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Dnase2bQ9QY48 354 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Wnk2Q3UH66 2149 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Dock9Q8BIK4 2055 aa11.54□□□□□ -0.56
Nup88-201ENSMUST00000035283 Prune2Q52KR3 3084 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Muc3E9PWP7 378 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Fam170bE9PXT9 378 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vmn1r160E9Q346 307 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm43191F6YIH5 235 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vmn1r123L7N270 307 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Evx1P23683 416 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Npbwr1P49681 329 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Ear1P97426 155 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 EcscrQ3TZW0 214 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Zfp729bQ80VN4 1045 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mrps10Q80ZK0 160 aaKnown RBP11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr112Q8C0S2 320 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rps19bp1Q8C6B9 143 aaKnown RBP11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gltpd2Q8K0R6 321 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr113Q8VEU4 312 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr56Q8VGD6 315 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Defb6Q91VD6 63 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Zfp958Q99LG7 467 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Tstd3Q9D0B5 157 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 DhdhQ9DBB8 333 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cacna1bO55017 2327 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm3676D3Z236 184 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm20918J3QN17 227 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 P18528 98 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr328Q5NCD3 310 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cd200r1lQ6XJV6 249 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sulf2Q8CFG0 875 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cadm4Q8R464 388 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 RabepkQ8VCH5 380 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Ear10Q923L6 156 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Dtwd2Q9D0U1 298 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 4933407L21RikQ9D476 131 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sgms2Q9D4B1 365 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cdk20Q9JHU3 346 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Prg4Q9JM99 1054 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Tmem196V9GX04 182 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 F8Q06194 2319 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Pde4dipQ80YT7 2224 aa11.53□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rsg1A2A825 258 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Irf2bp2E9Q1P8 570 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 H2-M10.1O19443 331 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Hbb-yP02104 147 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sod1P08228 154 aaKnown RBP11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 MyogP12979 224 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Chrna7P49582 502 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 PjvkQ0ZLH2 352 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Osgin2Q3TEE9 550 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 GalnsQ571E4 520 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mindy2Q6PDI6 601 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Zfp677Q6PEP4 634 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Nup35Q8R4R6 325 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mrpl27Q99N92 148 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Hdhd3Q9CYW4 251 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cst6Q9D1B1 149 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rpl7l1Q9D8M4 246 aaKnown RBP11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mdp1Q9D967 164 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Il17bQ9QXT6 180 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Pex14Q9R0A0 376 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Adam11Q9R1V4 773 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 Spry4Q9WTP2 300 aa11.52□□□□□ -0.56
Nup88-201ENSMUST00000035283 H2-DMaP28078 261 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 LepP41160 167 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 LumP51885 338 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Mettl4Q3U034 471 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gfod1Q3UHD2 390 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm10447Q3UQ92 135 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Fbxw20Q5U467 468 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tle4Q62441 773 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Q6PIU9 354 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1299Q7TQX5 312 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr804Q7TRH7 314 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Osbpl11Q8CI95 751 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Myct1Q8R411 188 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1141Q8VFQ7 311 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr136Q8VG72 312 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Syt7Q9R0N7 403 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Pcsk5Q04592 1877 aa11.52□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm13083A2AGW5 501 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1029A2ATE0 324 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr556E9Q549 324 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 C2cd4dP0CG09 341 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Isoc2aP85094 206 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Defb25Q30KN8 71 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm6899Q3USS0 134 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms