RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 HSPB7Q9UBY9 170 aa14.01□□□□□ -0.17
PHGDH-234ENST00000642041 CACNG5Q9UF02 275 aa14.01□□□□□ -0.17
PHGDH-234ENST00000642041 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 CHST1O43916 411 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 TSPAN9O75954 239 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 KRASP01116 189 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 IGKV1-39P01597 117 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 IGKV1-5P01602 117 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 IGKV1D-39P04432 117 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 P0C879 139 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
PHGDH-234ENST00000642041 RPL30P62888 115 aaKnown RBP14□□□□□ -0.17
PHGDH-234ENST00000642041 ZNF273Q14593 569 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 ABHD12Q8N2K0 398 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 OR4A16Q8NH70 328 aa14□□□□□ -0.17
PHGDH-234ENST00000642041 SSBP3Q9BWW4 388 aaPredicted RBP14□□□□□ -0.17
PHGDH-234ENST00000642041 KMT2CQ8NEZ4 4911 aaKnown RBP14□□□□□ -0.17
PHGDH-234ENST00000642041 LYNX1G3V0Z9 82 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 SEC11BP0C7V7 166 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 LYNX1P0DP58 116 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 EPHA1P21709 976 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 CEACAM3P40198 252 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 LGALS7P47929 136 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 CAV2P51636 162 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 SPCS3P61009 180 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 TNFRSF9Q07011 255 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 PRAMEF5Q5TYX0 476 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 NCR3LG1Q68D85 454 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 DUX4L9Q6RFH8 374 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 MRPL41Q8IXM3 137 aaKnown RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 PUSL1Q8N0Z8 303 aaKnown RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 STPG2Q8N412 459 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 TMEM252Q8N6L7 170 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 OR4C13Q8NGP0 309 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 GNPNAT1Q96EK6 184 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 SAT2Q96F10 170 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 TSNAXQ99598 290 aaKnown RBP13.99□□□□□ -0.17
PHGDH-234ENST00000642041 ZNF251Q9BRH9 671 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 CLEC7AQ9BXN2 247 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 PFDN2Q9UHV9 154 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 PRNDQ9UKY0 176 aa13.99□□□□□ -0.17
PHGDH-234ENST00000642041 LOC105371242A0A075B767 164 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 IGHV4-61A0A0C4DH41 118 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 LINC00473A8K010 186 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 ENSAO43768 121 aaKnown RBP13.98□□□□□ -0.17
PHGDH-234ENST00000642041 RBMXL2O75526 392 aaKnown RBP13.98□□□□□ -0.17
PHGDH-234ENST00000642041 LY6HO94772 140 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 S1PR2O95136 353 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 SPDEFO95238 335 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 SULT1A1P50225 295 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 UBE2KP61086 200 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 POLR2GP62487 172 aaKnown RBP eCLIP13.98□□□□□ -0.17
PHGDH-234ENST00000642041 BLOC1S1P78537 153 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-234ENST00000642041 CXorf66Q5JRM2 361 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-234ENST00000642041 BTNL3Q6UXE8 466 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 OR5AN1Q8NGI8 311 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 OR1S2Q8NGQ3 325 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 PIMREGQ9BSJ6 248 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 HIPK2Q9H2X6 1198 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 C11orf1Q9H5F2 150 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 SLC35D1Q9NTN3 355 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 ZNF257Q9Y2Q1 563 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 KPTNQ9Y664 436 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 CMYA5Q8N3K9 4069 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 DOCK11Q5JSL3 2073 aa13.98□□□□□ -0.17
PHGDH-234ENST00000642041 OOSP1A8MZH6 123 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 SSSCA1O60232 199 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 ATP6V1G1O75348 118 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 PROP1O75360 226 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 FOXH1O75593 365 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 IFNA5P01569 189 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 G6PCP35575 357 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 EWSR1Q01844 656 aaKnown RBP eCLIP13.97□□□□□ -0.17
PHGDH-234ENST00000642041 TREML4Q6UXN2 200 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 TGIF2LXQ8IUE1 241 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 ODF3L1Q8IXM7 274 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 PINX1Q96BK5 328 aaKnown RBP13.97□□□□□ -0.17
PHGDH-234ENST00000642041 FAM210AQ96ND0 272 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 PARD6GQ9BYG4 376 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-234ENST00000642041 UNKLQ9H9P5 680 aaKnown RBP13.97□□□□□ -0.17
PHGDH-234ENST00000642041 PSENENQ9NZ42 101 aa13.97□□□□□ -0.17
PHGDH-234ENST00000642041 WNK1Q9H4A3 2382 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 A8MXK9 166 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 RAMP3O60896 148 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 CCL3L1P16619 93 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 TMEM177Q53S58 311 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 AVPI1Q5T686 147 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 LHX4Q969G2 390 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 FLYWCH2Q96CP2 140 aaKnown RBP13.96□□□□□ -0.17
PHGDH-234ENST00000642041 ARV1Q9H2C2 271 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 CYTL1Q9NRR1 136 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 BET1LQ9NYM9 111 aa13.96□□□□□ -0.17
PHGDH-234ENST00000642041 OR8U8P0C7N1 319 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 PRTN3P24158 256 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 GNG10P50151 68 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 AWAT1Q58HT5 328 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 RPL39P5Q59GN2 51 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 SHISA2Q6UWI4 295 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms