RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NHLH2Q02577 135 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 SPANXN5Q5MJ07 72 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 HSD17B13Q7Z5P4 300 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 LILRB2Q8N423 598 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 EIF4E3Q8N5X7 224 aaKnown RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 COMMD1Q8N668 190 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 TEX45Q8NA69 505 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 BPESC1Q9GZL8 116 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 MS4A7Q9GZW8 240 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 TCF19Q9Y242 345 aa7.91□□□□□ -1.14
PHGDH-215ENST00000641371 TBL2Q9Y4P3 447 aaKnown RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 ASH1LQ9NR48 2969 aaKnown RBP7.91□□□□□ -1.14
PHGDH-215ENST00000641371 RAB19A4D1S5 217 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TEX46H3BTG2 121 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 KCNAB3O43448 404 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 MPDU1O75352 247 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 KBTBD11O94819 623 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TMEM50AO95807 157 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 IGHV4-39P01824 125 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 OR9G9P0C7N8 305 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SLC25A16P16260 332 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 CD1BP29016 333 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 HOXA1P49639 335 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 COMPP49747 757 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 ATP5J2P56134 94 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 RPS16P62249 146 aaKnown RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SERF2P84101 59 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 PRCDQ00LT1 54 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 IZUMO4Q1ZYL8 232 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SP5Q6BEB4 398 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 UQCC3Q6UW78 93 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 IL34Q6ZMJ4 242 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SSX9Q7RTT3 188 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 COMMD7Q86VX2 200 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 ZNF525Q8N782 197 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 OR4P4Q8NGL7 312 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 OR1L8Q8NGR8 309 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 CLDND2Q8NHS1 167 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TMEM167AQ8TBQ9 72 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 C10orf105Q8TEF2 133 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TMED6Q8WW62 240 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TMEM147Q9BVK8 224 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 QTRT1Q9BXR0 403 aaKnown RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 PLEKHA3Q9HB20 300 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 LPAR2Q9HBW0 351 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 HEYLQ9NQ87 328 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-215ENST00000641371 PARP11Q9NR21 331 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 KCNIP2Q9NS61 270 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 TIMM9Q9Y5J7 89 aa7.9□□□□□ -1.14
PHGDH-215ENST00000641371 MAST4O15021 2626 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 IGHV1-3A0A0C4DH29 117 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 ODF3BA8MYP8 253 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 CST7O76096 145 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 METTL15P1P0C7V9 234 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 SAA1P0DJI8 122 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 GATA3P23771 443 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 LGALS4P56470 323 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 OR2B8PP59922 312 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 RAB2AP61019 212 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 LMO4P61968 165 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 ARF6P62330 175 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 RPL8P62917 257 aaKnown RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 ERHP84090 104 aaKnown RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 SLC38A11Q08AI6 406 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 CLINT1Q14677 625 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 TPTE2P1Q5T6R2 138 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 MMD2Q8IY49 270 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 PNKDQ8N490 385 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 Q8N7P7 452 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 LFNGQ8NES3 379 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 SRSF8Q9BRL6 282 aaKnown RBP7.89□□□□□ -1.15
PHGDH-215ENST00000641371 COMMD5Q9GZQ3 224 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 UQCC1Q9NVA1 299 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 OR51B2Q9Y5P1 312 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 MYO18BQ8IUG5 2567 aa7.89□□□□□ -1.15
PHGDH-215ENST00000641371 BTBD17A6NE02 478 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 VWC2LB2RUY7 222 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 C17orf112F2Z3M2 114 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 H3BP45 60 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 LY6LH3BQJ8 138 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 ACTL6BO94805 426 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 NXPH3O95157 252 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 IFNA10P01566 189 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 HBE1P02100 147 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 MBP02144 154 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 IGKV1-16P04430 117 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 COX7A1P24310 79 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 VDAC2P45880 294 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-215ENST00000641371 UBE2E1P51965 193 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 SUB1P53999 127 aaKnown RBP eCLIP7.88□□□□□ -1.15
PHGDH-215ENST00000641371 LINC00205P59089 165 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 DLK1P80370 383 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 HABP2Q14520 560 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-215ENST00000641371 VWC2Q2TAL6 325 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms