RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 RPS10P5Q9NQ39 176 aa4.62□□□□□ -1.67
CHD2-227ENST00000637572 C19orf12Q9NSK7 152 aa4.62□□□□□ -1.67
CHD2-227ENST00000637572 MED9Q9NWA0 146 aa4.62□□□□□ -1.67
CHD2-227ENST00000637572 TECRQ9NZ01 308 aaKnown RBP4.62□□□□□ -1.67
CHD2-227ENST00000637572 ZNF835Q9Y2P0 537 aa4.62□□□□□ -1.67
CHD2-227ENST00000637572 AUP1Q9Y679 476 aa4.62□□□□□ -1.67
CHD2-227ENST00000637572 IGKV1-12A0A0C4DH73 117 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 A6NNC1 897 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CEACAM18A8MTB9 384 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 NAPSAO96009 420 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 IGKV1D-12P01611 117 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 IGLV3-1P01715 115 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 FBXL19-AS1Q494R0 122 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 MINOS1Q5TGZ0 78 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 FAM71F2Q6NXP2 309 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 LCN15Q6UWW0 184 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 SMIM8Q96KF7 97 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 GFI1Q99684 422 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 GGACTQ9BVM4 153 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 C19orf24Q9BVV8 132 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 SERTAD4Q9NUC0 356 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 HILPDAQ9Y5L2 63 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 MINOS1-NBL1R4GNA1 71 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 A0A1W2PPE3 182 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 NPIPB11E5RHQ5 1161 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CGAP01215 116 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CXCL3P19876 107 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CDKN1AP38936 164 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CDC34P49427 236 aaPredicted RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 RAB9AP51151 201 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 CNN1P51911 297 aaKnown RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 BTNL8Q6UX41 500 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 LRP11Q86VZ4 500 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 PLPPR1Q8TBJ4 325 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 SDHCQ99643 169 aaPredicted RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 TXNDC17Q9BRA2 123 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 SMDT1Q9H4I9 107 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 PATZ1Q9HBE1 687 aaKnown RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 MANBALQ9NQG1 85 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 RPUSD1Q9UJJ7 312 aaKnown RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 B4DSR2 109 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 FAM157AC9JC47 383 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 E7EQL1 145 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 TGOLN2O43493 480 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 REG1BP48304 166 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 DYNLT3P51808 116 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 TNFRSF9Q07011 255 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 RELL2Q8NC24 303 aaPredicted RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 ANGPTL6Q8NI99 470 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 RPUSD4Q96CM3 377 aaKnown RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 AQP10Q96PS8 301 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 DMRTA2Q96SC8 542 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 PRORYQ9H606 182 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 SIRT7Q9NRC8 400 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 MMP26Q9NRE1 261 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 LYRM2Q9NU23 88 aaPredicted RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 GNG13Q9P2W3 67 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 TMEM56-RWDD3S4R434 201 aa4.61□□□□□ -1.67
CHD2-227ENST00000637572 COL5A1P20908 1838 aaPredicted RBP4.61□□□□□ -1.67
CHD2-227ENST00000637572 CD8AP01732 235 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 LMO1P25800 156 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 QRFPP83859 136 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 MORN2Q502X0 79 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 ZNF788Q6ZQV5 615 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 TMEM252Q8N6L7 170 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 OR10G4Q8NGN3 311 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 GPR146Q96CH1 333 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 NKX6-2Q9C056 277 aaPredicted RBP4.6□□□□□ -1.67
CHD2-227ENST00000637572 PLXND1Q9Y4D7 1925 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 IGKV1-27A0A075B6S5 117 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 MAP1LC3B2A6NCE7 125 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 C1orf196B1AJZ1 125 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 F8W735 103 aaPredicted RBP4.6□□□□□ -1.67
CHD2-227ENST00000637572 CD99P14209 185 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 CD1BP29016 333 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 AKR1C3P42330 323 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 TDGF1P3P51864 188 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 HLA-DRB5Q30154 266 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 WDR25Q64LD2 544 aaPredicted RBP4.6□□□□□ -1.67
CHD2-227ENST00000637572 Q6ZSR3 168 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 OR5T1Q8NG75 326 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 MAP1LC3BQ9GZQ8 125 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 C7orf69Q9H7B7 122 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 HEATR5AQ86XA9 2040 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 DSPP15924 2871 aaKnown RBP4.6□□□□□ -1.67
CHD2-227ENST00000637572 MLNRO43193 412 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 MOSP00540 346 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 UQCRFS1P47985 274 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 SSX2Q16385 188 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 ANKRD55Q3KP44 614 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 LRTM2Q8N967 370 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 ELF5Q9UKW6 265 aaPredicted RBP4.6□□□□□ -1.67
CHD2-227ENST00000637572 TCF19Q9Y242 345 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 MED12Q93074 2177 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 ZNF407Q9C0G0 2248 aa4.6□□□□□ -1.67
CHD2-227ENST00000637572 A0A1W2PS18 150 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms