RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	CCL2	P13500	99 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ZNF35	P13682	527 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	NQO1	P15559	274 aa	Known RBP	4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	DSTN	P60981	165 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CCL8	P80075	99 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	STX3	Q13277	289 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TAL2	Q16559	108 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	WDR86	Q86TI4	376 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ZNF418	Q8TF45	676 aa	Predicted RBP	4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	YIPF5	Q969M3	257 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ZNF414	Q96IQ9	312 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TSNAX	Q99598	290 aa	Known RBP	4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SULT4A1	Q9BR01	284 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TPT1P8	Q9HAU6	139 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	MED29	Q9NX70	200 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CALML5	Q9NZT1	146 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	POFUT2	Q9Y2G5	429 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TMEM14A	Q9Y6G1	99 aa		4.1	□□□□□ -1.75
SMARCA2-238	ENST00000635273		A0A096LPI6	279 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TMEM223	A0PJW6	202 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C5orf58	C9J3I9	102 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273		K7EN84	100 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	BIRC5	O15392	142 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TPST1	O60507	370 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	UPK1B	O75841	260 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	MPZL1	O95297	269 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TRBV12-3	P01733	135 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	MSMB	P08118	114 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	GLRX	P35754	106 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TMEM33	P57088	247 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ERVS71-1	P61550	626 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	VSNL1	P62760	191 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PMS2P3	Q13401	168 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	LIN52	Q52LA3	116 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	UGT2A3	Q6UWM9	527 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C20orf196	Q8IYI0	205 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RIBC1	Q8N443	379 aa	Predicted RBP	4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	NARS2	Q96I59	477 aa	Known RBP	4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TSPAN32	Q96QS1	320 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	WFDC6	Q9BQY6	131 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	VCX	Q9H320	206 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CACYBP	Q9HB71	228 aa	Known RBP	4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	VCX3A	Q9NNX9	186 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TAAR3P	Q9P1P4	343 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RAB26	Q9ULW5	256 aa		4.09	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PKD1L1	Q8TDX9	2849 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	IGKV1D-42	A0A075B6H8	117 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TRAV8-7	A0A075B6U6	113 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TRAV36DV7	A0A075B6V5	113 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273		A0A087WUJ7	227 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273		A0A1B0GWA3	101 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	C5orf63	A6NC05	138 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TVP23A	A6NH52	213 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	SEC14L6	B5MCN3	397 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273		H0YJW9	148 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ZNF207	O43670	478 aa	Known RBP	4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	OR2T1	O43869	369 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	FOXH1	O75593	365 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	SERPINB7	O75635	380 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	SC5D	O75845	299 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	RAB36	O95755	333 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	IL6	P05231	212 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ZNF14	P17017	642 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	EVX1	P49640	407 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	POLR2J	P52435	117 aa	Known RBP	4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	IFITM3	Q01628	133 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	GLO1	Q04760	184 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	DOCK11	Q5JSL3	2073 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	FAM27D1	Q5T7N8	215 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	HHAT	Q5VTY9	493 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TMEM236	Q5W0B7	351 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	KDM4D	Q6B0I6	523 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	EPGN	Q6UW88	154 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	COMTD1	Q86VU5	262 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	LRRC18	Q8N456	261 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	OR9I1	Q8NGQ6	314 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	SGMS2	Q8NHU3	365 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	KCNS1	Q96KK3	526 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ZNF75A	Q96N20	296 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ULBP2	Q9BZM5	246 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	UBAP1	Q9NZ09	502 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	VAX2	Q9UIW0	290 aa		4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273		V9GYY5	206 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCA2-238	ENST00000635273	MGAM2	Q2M2H8	2515 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TG	P01266	2768 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	DSPP	Q9NZW4	1301 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273		A0A0G2JMP0	313 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273		A0A0X1KG70	313 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	LOC102725191	A0A1B0GVB3	256 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	LINC00854	A0A1B0GVQ3	168 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	ISPD	A4D126	451 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	TRPC5OS	A6NMA1	111 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	PLPP3	O14495	311 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	UBD	O15205	165 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	GATC	O43716	136 aa	Known RBP	4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	UBL3	O95164	117 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	HLA-DQA1	P01909	254 aa		4.07	□□□□□ -1.76
SMARCA2-238	ENST00000635273	IDO1	P14902	403 aa		4.07	□□□□□ -1.76

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