RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 GNB1P62873 340 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 CX3CL1P78423 397 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 TRIM16LQ309B1 348 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 DMBX1Q8NFW5 382 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 ENKURQ8TC29 256 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
NEK3-210ENST00000620675 A0A1B0GW64 132 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 KBTBD11O94819 623 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 OR2A4O95047 310 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 NDUFA7O95182 113 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 CDS2O95674 445 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 HRASP01112 189 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 IGHG2P01859 326 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 OPN1MWP04001 364 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 IL6RP08887 468 aaPredicted RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 OR4E1P0C645 316 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 APELAP0DMC3 54 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 OPN1MW2P0DN77 364 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 OPN1MW3P0DN78 364 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 EGR2P11161 476 aaPredicted RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 DHRS2Q13268 280 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 POU2AF1Q16633 256 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 PRSS8Q16651 343 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 SELENOHQ8IZQ5 122 aaKnown RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 TCTEX1D1Q8N7M0 179 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 OR2A7Q96R45 310 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 PKD1L1Q8TDX9 2849 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 C9orf170A2RU37 121 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 ATP6V0E1O15342 81 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 DEFA1P59665 94 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 DEFA3P59666 94 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 KRTAP10-3P60369 221 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 SRSF4Q08170 494 aaKnown RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 DCTN2Q13561 401 aaKnown RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 TMEM268Q5VZI3 342 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 Q6ZRM9 215 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 C16orf95Q9H693 158 aa10.75□□□□□ -0.69
NEK3-210ENST00000620675 RANBP3Q9H6Z4 567 aaPredicted RBP10.75□□□□□ -0.69
NEK3-210ENST00000620675 G3V318 75 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 SFT2D2O95562 160 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
NEK3-210ENST00000620675 P0C879 139 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 OR2B8PP59922 312 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
NEK3-210ENST00000620675 LYZL2Q7Z4W2 148 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 SLC35E3Q7Z769 313 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 TMEM167AQ8TBQ9 72 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 PARP11Q9NR21 331 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
NEK3-210ENST00000620675 NUBP2Q9Y5Y2 271 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 WSB1Q9Y6I7 421 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 TMEM56-RWDD3S4R434 201 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
NEK3-210ENST00000620675 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 HAX1O00165 279 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 UPK2O00526 184 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 TNXAQ16473 311 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 OR2T6Q8NHC8 308 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 GRPEL2Q8TAA5 225 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 OR51J1Q9H342 316 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 CGB1A6NKQ9 187 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
NEK3-210ENST00000620675 FXYD3Q14802 87 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 AWAT1Q58HT5 328 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 ZNF562Q6V9R5 426 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 LYG2Q86SG7 212 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 ZNF329Q86UD4 541 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 OR4F5Q8NH21 305 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 RBPMSQ93062 196 aaKnown RBP10.73□□□□□ -0.69
NEK3-210ENST00000620675 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
NEK3-210ENST00000620675 A0A0B4J293 547 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 CLPSL1A2RUU4 121 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 AKR1C2P52895 323 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 PROK1P58294 105 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 ERVK-16P61578 105 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 C19orf35Q6ZS72 473 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 ZNF695Q8IW36 515 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 TMEM158Q8WZ71 300 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 CNIH1O95406 144 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 MECP2P51608 486 aaKnown RBP10.72□□□□□ -0.69
NEK3-210ENST00000620675 RPL8P62917 257 aaKnown RBP10.72□□□□□ -0.69
NEK3-210ENST00000620675 ECSCRQ19T08 205 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 ASPHD1Q5U4P2 390 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 PLET1Q6UQ28 207 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 H2BFWTQ7Z2G1 175 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 C11orf44Q8N8P7 122 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 ABHD5Q8WTS1 349 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms