RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 SPTBP11277 2137 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 UBE2V2Q15819 145 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 PRSS53Q2L4Q9 553 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 PPP1R32Q7Z5V6 425 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 RAB24Q969Q5 203 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 GATA2P23769 480 aaPredicted RBP13.17□□□□□ -0.3
TNXB-209ENST00000613214 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNXB-209ENST00000613214 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 LEMD1Q68G75 181 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 IGHV4-39P01824 125 aa13.17□□□□□ -0.3
TNXB-209ENST00000613214 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
TNXB-209ENST00000613214 MTCL1Q9Y4B5 1905 aaKnown RBP13.16□□□□□ -0.3
TNXB-209ENST00000613214 PPIFP30405 207 aaKnown RBP13.16□□□□□ -0.3
TNXB-209ENST00000613214 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 H0Y980 276 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 NGFRP08138 427 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 HMGA2P52926 109 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 GLI3P10071 1580 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 TYMSP04818 313 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 SELENOTP62341 195 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 NHSQ6T4R5 1651 aa13.16□□□□□ -0.3
TNXB-209ENST00000613214 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
TNXB-209ENST00000613214 FOCADQ5VW36 1801 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 OR9G1Q8NH87 305 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 PLAC1Q9HBJ0 212 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 SEMA5BQ9P283 1151 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 FHITP49789 147 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
TNXB-209ENST00000613214 C9orf62Q8N4C0 152 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNXB-209ENST00000613214 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 LHFPL6Q9Y693 200 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 APOMO95445 188 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 C1QL2Q7Z5L3 287 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 TMEM252Q8N6L7 170 aa13.15□□□□□ -0.3
TNXB-209ENST00000613214 C2orf88Q9BSF0 95 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 ERGP11308 486 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 CTDSPLO15194 276 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 CXCL2P19875 107 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 ZNF385CQ66K41 422 aaPredicted RBP13.14□□□□□ -0.31
TNXB-209ENST00000613214 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
TNXB-209ENST00000613214 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
TNXB-209ENST00000613214 CDS2O95674 445 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 GALP22466 123 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 CD7P09564 240 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.14□□□□□ -0.31
TNXB-209ENST00000613214 ALKBH7Q9BT30 221 aaPredicted RBP13.14□□□□□ -0.31
TNXB-209ENST00000613214 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
TNXB-209ENST00000613214 C4orf51C9J302 202 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 KLF4O43474 513 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 TMEM127O75204 238 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 CYB5R2Q6BCY4 276 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 STRCQ7RTU9 1775 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 TRAV21A0A0B4J279 112 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 RAMP1O60894 148 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 SCAND1P57086 179 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 FBLN7Q53RD9 439 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 NABP2Q9BQ15 211 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 B9A039 149 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 OR10S1Q8NGN2 331 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 SLC17A3O00476 420 aa13.13□□□□□ -0.31
TNXB-209ENST00000613214 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 FGF5P12034 268 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 ASIPP42127 132 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TMEM219Q86XT9 240 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 HOXD4P09016 255 aaPredicted RBP13.12□□□□□ -0.31
TNXB-209ENST00000613214 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 EVI2AP22794 236 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TFF3Q07654 80 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 CHAC2Q8WUX2 184 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 CGAP01215 116 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
TNXB-209ENST00000613214 PKIAP61925 76 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TEX45Q8NA69 505 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
TNXB-209ENST00000613214 CCL3L1P16619 93 aa13.11□□□□□ -0.31
TNXB-209ENST00000613214 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
TNXB-209ENST00000613214 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
TNXB-209ENST00000613214 TRGV4A0A0C4DH28 118 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms