RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 RNASE10Q5GAN6 216 aaKnown RBP12.97□□□□□ -0.33
SSBP4-213ENST00000602088 LPCAT3Q6P1A2 487 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 SSX9Q7RTT3 188 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 PHB2Q99623 299 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 RSRP1Q9BUV0 290 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 TINAGL1Q9GZM7 467 aaPredicted RBP12.97□□□□□ -0.33
SSBP4-213ENST00000602088 RBM38Q9H0Z9 239 aaKnown RBP12.97□□□□□ -0.33
SSBP4-213ENST00000602088 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
SSBP4-213ENST00000602088 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
SSBP4-213ENST00000602088 CCDC160A6NGH7 325 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 CTDSPLO15194 276 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 BRI3O95415 125 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 TRGV3P03979 118 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 IFNA6P05013 189 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 APELAP0DMC3 54 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 NQO2P16083 231 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 F2RP25116 425 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 MAS1LP35410 378 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 TPPP2P59282 170 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 TAS2R31P59538 309 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 SSBP1Q04837 148 aaKnown RBP12.96□□□□□ -0.33
SSBP4-213ENST00000602088 IL18Q14116 193 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-213ENST00000602088 C10orf55Q5SWW7 151 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 FOXB2Q5VYV0 432 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 OR4A47Q6IF82 309 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 ARRDC1Q8N5I2 433 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 TMEM229BQ8NBD8 167 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 MCFD2Q8NI22 146 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 SMIM4Q8WVI0 70 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 SPIN2AQ99865 258 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 SPIN2BQ9BPZ2 258 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 MCRIP2Q9BUT9 160 aaKnown RBP12.96□□□□□ -0.33
SSBP4-213ENST00000602088 ALX4Q9H161 411 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-213ENST00000602088 ZNF355PQ9NSJ1 428 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 BET1LQ9NYM9 111 aa12.96□□□□□ -0.33
SSBP4-213ENST00000602088 TGP01266 2768 aa12.96□□□□□ -0.34
SSBP4-213ENST00000602088 S1PR2O95136 353 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 CD74P04233 296 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
SSBP4-213ENST00000602088 LGALS1P09382 135 aaKnown RBP12.95□□□□□ -0.34
SSBP4-213ENST00000602088 TNFSF8P32971 234 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 RAB25P57735 213 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 ZNF616Q08AN1 781 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
SSBP4-213ENST00000602088 DGCR14Q96DF8 476 aaKnown RBP12.95□□□□□ -0.34
SSBP4-213ENST00000602088 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 LPAR6P43657 344 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 TAS2R19P59542 299 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 RPL8P62917 257 aaKnown RBP12.94□□□□□ -0.34
SSBP4-213ENST00000602088 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 PHLDA2Q53GA4 152 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 STEAP1BQ6NZ63 245 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 ADAD2Q8NCV1 583 aaKnown RBP12.94□□□□□ -0.34
SSBP4-213ENST00000602088 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 SOSTQ9BQB4 213 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 GPR61Q9BZJ8 451 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 COA4Q9NYJ1 87 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 COMMD9Q9P000 198 aa12.94□□□□□ -0.34
SSBP4-213ENST00000602088 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
SSBP4-213ENST00000602088 A0A0G2JLM5 398 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 TEX22C9J3V5 150 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 E7EUB6 86 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 ZNF701M0R085 212 aaPredicted RBP12.93□□□□□ -0.34
SSBP4-213ENST00000602088 MPPED1O15442 326 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 RAB3DO95716 219 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
SSBP4-213ENST00000602088 S100GP29377 79 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 RPL27AP46776 148 aaKnown RBP12.93□□□□□ -0.34
SSBP4-213ENST00000602088 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 DPF1Q92782 380 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 HRASLSQ9HDD0 168 aa12.93□□□□□ -0.34
SSBP4-213ENST00000602088 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 A0A087WW49 117 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 A0A1B0GW64 132 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 LINC01619G3V211 115 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 UPK2O00526 184 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 ZNF735P0CB33 412 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 HLA-GP17693 338 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 DMBX1Q8NFW5 382 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 TERB2Q8NHR7 220 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 SLC2A9Q9NRM0 540 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
SSBP4-213ENST00000602088 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
SSBP4-213ENST00000602088 HMX3A6NHT5 357 aa12.91□□□□□ -0.34
SSBP4-213ENST00000602088 MARCH11A6NNE9 402 aa12.91□□□□□ -0.34
SSBP4-213ENST00000602088 GSTZ1O43708 216 aaPredicted RBP12.91□□□□□ -0.34
SSBP4-213ENST00000602088 RBMXL2O75526 392 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms