RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C8orf59Q8N0T1 100 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 BATF2Q8N1L9 274 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 GAPTQ8N292 157 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 OSR2Q8N2R0 312 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 MS4A15Q8N5U1 240 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 LINC00311Q8N616 119 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 TPRX1Q8N7U7 411 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF491Q8N8L2 437 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4D6Q8NGJ1 314 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR52M1Q8NGK5 317 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR5D18Q8NGL1 313 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR9G1Q8NH87 305 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 TNFAIP8L1Q8WVP5 186 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 GHSRQ92847 366 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 AKR1E2Q96JD6 320 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CXorf58Q96LI9 332 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RBM14Q96PK6 669 aaKnown RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 GPER1Q99527 375 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SPAG8Q99932 426 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 UQCC2Q9BRT2 126 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 METTL9Q9H1A3 318 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 VCXQ9H320 206 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF702PQ9H963 129 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF286AQ9HBT8 521 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SPACA1Q9HBV2 294 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ABCB10Q9NRK6 738 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 TAS2R4Q9NYW5 299 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CALYQ9NYX4 217 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 GHRLQ9UBU3 117 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CLEC2DQ9UHP7 191 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ST3GAL6Q9Y274 331 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SORL1Q92673 2214 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 TNCP24821 2201 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAV8-7A0A075B6U6 113 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAV9-2A0A087WT02 112 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MEIKINA0A087WXM9 373 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 SMIM30A4D0T7 59 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 KLLNB2CW77 178 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 C15orf65H3BRN8 121 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CCRL2O00421 344 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 TOR1AO14656 332 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 GEMIN2O14893 280 aaKnown RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MYL12BO14950 172 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PIN1P1O15428 100 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 FGF16O43320 207 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ORC5O43913 435 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CA11O75493 328 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR7C1O76099 320 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR2F2O95006 317 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CDRT1O95170 752 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MT-ND4P03905 459 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OPN1MWP04001 364 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CDK1P06493 297 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 GNAO1P09471 354 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 UBBP0CG47 229 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OPN1MW2P0DN77 364 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OPN1MW3P0DN78 364 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CALCBP10092 127 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 GTF2F2P13984 249 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CELP19835 753 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PAX6P26367 422 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MAPK3P27361 379 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 RANBP1P43487 201 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR3A4PP47883 348 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB7AP51149 207 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB13P51153 203 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF137PP52743 207 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC35A2P78381 396 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF816Q0VGE8 651 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 DYNC1I2Q13409 638 aaKnown RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ATXN7L3Q14CW9 347 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 LY6EQ16553 131 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PIGYQ3MUY2 71 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 TIMM50Q3ZCQ8 353 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 AARDQ4LEZ3 155 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 LY6G6FQ5SQ64 297 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 C1orf100Q5SVJ3 147 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 TPTE2P1Q5T6R2 138 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 KPRPQ5T749 579 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PRAMEF5Q5TYX0 476 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 NDUFA11Q86Y39 141 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 STX19Q8N4C7 294 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 SUMF2Q8NBJ7 301 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 NDNFQ8TB73 568 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PLPPR1Q8TBJ4 325 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MRAPQ8TCY5 172 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PHYHIPQ92561 330 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MYDGFQ969H8 173 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 DERL3Q96Q80 235 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 S100A13Q99584 98 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF184Q99676 751 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 MND1Q9BWT6 205 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 DUSP21Q9H596 190 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ISYNA1Q9NPH2 558 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 IDI2-AS1Q9NZ38 188 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 CKLFQ9UBR5 152 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 KIF25Q9UIL4 384 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ING4Q9UNL4 249 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 PSG11Q9UQ72 335 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms