RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C19orf54Q5BKX5 351 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 OR5B12Q96R08 314 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 KLK11Q9UBX7 282 aa13.55□□□□□ -0.24
SHKBP1-203ENST00000594298 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 GNRHRP30968 328 aa13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 OR2B11Q5JQS5 317 aa13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 UNQ5815/PRO19632Q6UWF5 114 aa13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 NXF2Q9GZY0 626 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 A3GALT2U3KPV4 340 aa13.54□□□□□ -0.24
SHKBP1-203ENST00000594298 RYR2Q92736 4967 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 GPR31O00270 319 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 CTDSPLO15194 276 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 ACTL6BO94805 426 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 TAS2R19P59542 299 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 NDPQ00604 133 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 MMD2Q8IY49 270 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 SPAG16Q8N0X2 631 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 ARRDC1Q8N5I2 433 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 TMEM229BQ8NBD8 167 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 DLX4Q92988 240 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 TPSG1Q9NRR2 321 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 NDUFA13Q9P0J0 144 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 STAB2Q8WWQ8 2551 aa13.53□□□□□ -0.24
SHKBP1-203ENST00000594298 A0A1W2PN81 502 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 LINC01619G3V211 115 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 SAP30O75446 220 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 OR2A4O95047 310 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 HPRT1P00492 218 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 EGR2P11161 476 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 GP9P14770 177 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 SPNP16150 400 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 S100A5P33763 92 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 CHRNA7P36544 502 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 UCP3P55916 312 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 PRSS8Q16651 343 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 ACSM6Q6P461 480 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 LFNGQ8NES3 379 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 GRPEL2Q8TAA5 225 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 SMIM4Q8WVI0 70 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 OR2A7Q96R45 310 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 ALX4Q9H161 411 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 FBXO7Q9Y3I1 522 aa13.52□□□□□ -0.25
SHKBP1-203ENST00000594298 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 FABP12A6NFH5 140 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 M0QYG6 137 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 ARPC1BO15143 372 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 SOX15O60248 233 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 PGLYRP1O75594 196 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 CD3DP04234 171 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 LGALS1P09382 135 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 FRMD6-AS1P0C7T7 363 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 SAA1P0DJI8 122 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 TNFSF8P32971 234 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 SLURP1P55000 103 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 PJVKQ0ZLH3 352 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 TNXAQ16473 311 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 OR6Q1Q8NGQ2 317 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 RHOVQ96L33 236 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
SHKBP1-203ENST00000594298 RAB3DO95716 219 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 NQO2P16083 231 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 MAS1LP35410 378 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 BRWD1-AS2P59051 145 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 TAS2R31P59538 309 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 MEF2DQ14814 521 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 STEAP1BQ6NZ63 245 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 OR4A5Q8NH83 315 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 PHB2Q99623 299 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 RSRP1Q9BUV0 290 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 SLA2Q9H6Q3 261 aa13.5□□□□□ -0.25
SHKBP1-203ENST00000594298 IGHV4OR15-8A0A075B7B6 117 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 A0A087WW49 117 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 H3BUA1 57 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 GSTZ1O43708 216 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 CD74P04233 296 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 RLN1P04808 185 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 F2RP25116 425 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 IDO2Q6ZQW0 420 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 ZNF486Q96H40 463 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 TINAGL1Q9GZM7 467 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms