RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 SPIN2AQ99865 258 aa13.77□□□□□ -0.21
SRSF1-208ENST00000584773 SPIN2BQ9BPZ2 258 aa13.77□□□□□ -0.21
SRSF1-208ENST00000584773 EHFQ9NZC4 300 aa13.77□□□□□ -0.21
SRSF1-208ENST00000584773 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
SRSF1-208ENST00000584773 CREBL2O60519 120 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-208ENST00000584773 TMEM127O75204 238 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 OR2J3O76001 311 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
SRSF1-208ENST00000584773 TTC9CQ8N5M4 171 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 OR51H1Q8NH63 302 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 NAA50Q9GZZ1 169 aaKnown RBP13.76□□□□□ -0.21
SRSF1-208ENST00000584773 COMMD3Q9UBI1 195 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
SRSF1-208ENST00000584773 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 TRAV3A0A0B4J244 114 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 CGB1A6NKQ9 187 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 IGLV1-51P01701 117 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 SMIM18P0DKX4 95 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 AREGP15514 252 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 RPA2P15927 270 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 GIMAP1Q8WWP7 306 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 ELOVL1Q9BW60 279 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 S4R3C0 116 aa13.75□□□□□ -0.21
SRSF1-208ENST00000584773 BMPR1BO00238 502 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 S1PR2O95136 353 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 REG1AP05451 166 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 GNRHRP30968 328 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 HERV-K104P61576 105 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 MSMO1Q15800 293 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 SBSPONQ8IVN8 264 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 VSTM2AQ8TAG5 236 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 ZNF2Q9BSG1 426 aaPredicted RBP13.74□□□□□ -0.21
SRSF1-208ENST00000584773 FXYD6Q9H0Q3 95 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 U3KQK5 164 aa13.74□□□□□ -0.21
SRSF1-208ENST00000584773 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 PPP5D1E7EU14 171 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 HRASP01112 189 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 CSN3P07498 182 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 ZNF735P0CB33 412 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 AADACL3Q5VUY0 350 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 HRASLSQ9HDD0 168 aa13.73□□□□□ -0.21
SRSF1-208ENST00000584773 HPGDSO60760 199 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 NDUFB8O95169 186 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
SRSF1-208ENST00000584773 FRMD6-AS1P0C7T7 363 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 NHLRC4P0CG21 123 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-208ENST00000584773 HLA-GP17693 338 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 NAT1P18440 290 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 EDN2P20800 178 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 HLA-DMAP28067 261 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 PRSS3P35030 304 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 RPL8P62917 257 aaKnown RBP13.72□□□□□ -0.21
SRSF1-208ENST00000584773 CATR1Q13166 79 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 SNX29P2Q8IUI4 249 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 LYSMD2Q8IV50 215 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 OR5H2Q8NGV7 314 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 WWC2-AS2Q96NR7 200 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 SLC2A9Q9NRM0 540 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 BET1LQ9NYM9 111 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 ZNF257Q9Y2Q1 563 aa13.72□□□□□ -0.21
SRSF1-208ENST00000584773 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.71□□□□□ -0.21
SRSF1-208ENST00000584773 DPPA5A6NC42 116 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 IZUMO1RA6ND01 250 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 NPIPB5A8MRT5 1133 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 RLN1P04808 185 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 ELK1P19419 428 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 HRH1P35367 487 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 DHRS11Q6UWP2 260 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 Q8N1Y9 231 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 NECAP1Q8NC96 275 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 MOB3AQ96BX8 217 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 KCTD12Q96CX2 325 aaKnown RBP13.71□□□□□ -0.21
SRSF1-208ENST00000584773 FBXL7Q9UJT9 491 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
SRSF1-208ENST00000584773 RBFOX2O43251 390 aaKnown RBP eCLIP13.7□□□□□ -0.224e-10■■■■□ 23
SRSF1-208ENST00000584773 HPRT1P00492 218 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 PSMB6P28072 239 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 MAS1LP35410 378 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 TAS2R31P59538 309 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 RNASE12Q5GAN4 147 aaKnown RBP13.7□□□□□ -0.22
SRSF1-208ENST00000584773 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 GPX8Q8TED1 209 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
SRSF1-208ENST00000584773 UPK2O00526 184 aa13.69□□□□□ -0.22
SRSF1-208ENST00000584773 PGLYRP1O75594 196 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-208ENST00000584773 CRYGCP07315 174 aa13.69□□□□□ -0.22
SRSF1-208ENST00000584773 NQO2P16083 231 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms