RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PIGPP57054 158 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 SURF2Q15527 256 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 LCNL1Q6ZST4 164 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 TBC1D26Q86UD7 250 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 Q8N9W7 124 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 RITA1Q96K30 269 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 LSM4Q9Y4Z0 139 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 TNCP24821 2201 aa11.57□□□□□ -0.56
NPLOC4-207ENST00000572346 NHLRC4P0CG21 123 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 CNTFRP26992 372 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 OSR1Q8TAX0 266 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 CD300LFQ8TDQ1 290 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 GON7Q9BXV9 100 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 GPR132Q9UNW8 380 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 U3KQK5 164 aa11.56□□□□□ -0.56
NPLOC4-207ENST00000572346 RRHO14718 337 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 MPPED1O15442 326 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 LYRM1O43325 122 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 UPK1BO75841 260 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 HRASP01112 189 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 F2RP25116 425 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 CDX1P47902 265 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 RND3P61587 244 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 PSG5Q15238 335 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 CXorf66Q5JRM2 361 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 RNF152Q8N8N0 203 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 NPBQ8NG41 125 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 OR5M8Q8NGP6 311 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 PRR25Q96S07 402 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 FBXL15Q9H469 300 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 PLSCR3Q9NRY6 295 aa11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-207ENST00000572346 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 SLC25A17O43808 307 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 SPDEFO95238 335 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 HPRT1P00492 218 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 ELANEP08246 267 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 CCR6P51684 374 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 FOXE3Q13461 319 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 C9orf66Q5T8R8 295 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 LIN54Q6MZP7 749 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 MZT2BQ6NZ67 158 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 MRGPRFQ96AM1 343 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 AIFM2Q9BRQ8 373 aa11.54□□□□□ -0.56
NPLOC4-207ENST00000572346 PLA2G10O15496 165 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 NDUFA3O95167 84 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 SERPINE2P07093 398 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 AKR1C4P17516 323 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 LPAR6P43657 344 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 ERVK-16P61578 105 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 CFHR3Q02985 330 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 TMED4Q7Z7H5 227 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 FAM71E2Q8N5Q1 922 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 C5orf66Q9H5L9 145 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 VSIG4Q9Y279 399 aa11.53□□□□□ -0.56
NPLOC4-207ENST00000572346 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 SEC14L6B5MCN3 397 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 NQO2P16083 231 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 DEFA1P59665 94 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 DEFA3P59666 94 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 UBE2KP61086 200 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 VSTM2AQ8TAG5 236 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 C4orf3Q8WVX3 66 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 NAA60Q9H7X0 242 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
NPLOC4-207ENST00000572346 FAM240BA0A1B0GVZ2 78 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 H0Y980 276 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 S1PR2O95136 353 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 NDUFB6O95139 128 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 IGHG4P01861 327 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 VDAC1P21796 283 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 TAS2R31P59538 309 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 FHL3Q13643 280 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
NPLOC4-207ENST00000572346 TEX45Q8NA69 505 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms