RNA–Protein interactions for RNA: ENST00000562789.5

COMMD4-207, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-207ENST00000562789 FHL3Q13643 280 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 C10orf55Q5SWW7 151 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 C15orf40Q8WUR7 153 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 TMEM68Q96MH6 324 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 KLK11Q9UBX7 282 aa12.52□□□□□ -0.41
COMMD4-207ENST00000562789 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 H3BUA1 57 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 GPR31O00270 319 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
COMMD4-207ENST00000562789 OR8U8P0C7N1 319 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-207ENST00000562789 RUNX1Q01196 453 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 DEFA5Q01523 94 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
COMMD4-207ENST00000562789 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
COMMD4-207ENST00000562789 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 FCAMRQ8WWV6 532 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 ABHD1Q96SE0 405 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
COMMD4-207ENST00000562789 C13orf42A0A1B0GVH6 325 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 TPPPO94811 219 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 HPRT1P00492 218 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 IFNA6P05013 189 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 S100A5P33763 92 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 TAS2R31P59538 309 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 DGCR2P98153 550 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 IL18Q14116 193 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 PHLDA2Q53GA4 152 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 VAX1Q5SQQ9 334 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 REC114Q7Z4M0 266 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 SPIN2AQ99865 258 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 SPIN2BQ9BPZ2 258 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-207ENST00000562789 MTFP1Q9UDX5 166 aa12.5□□□□□ -0.41
COMMD4-207ENST00000562789 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
COMMD4-207ENST00000562789 IGHV4OR15-8A0A075B7B6 117 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 A0A087WW49 117 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 LINC01619G3V211 115 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 S1PR2O95136 353 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 CD3DP04234 171 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 NQO2P16083 231 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 S100GP29377 79 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
COMMD4-207ENST00000562789 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 MCFD2Q8NI22 146 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 S100ZQ8WXG8 99 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 FYTTD1Q96QD9 318 aaKnown RBP12.49□□□□□ -0.41
COMMD4-207ENST00000562789 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-207ENST00000562789 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
COMMD4-207ENST00000562789 A0A0G2JLM5 398 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-207ENST00000562789 RPA2P15927 270 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 MAS1LP35410 378 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 SLURP1P55000 103 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 TAS2R19P59542 299 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 ERVK-16P61578 105 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
COMMD4-207ENST00000562789 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
COMMD4-207ENST00000562789 SLC38A6Q8IZM9 456 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
COMMD4-207ENST00000562789 OR4A5Q8NH83 315 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 SLIRPQ9GZT3 109 aaKnown RBP12.48□□□□□ -0.41
COMMD4-207ENST00000562789 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
COMMD4-207ENST00000562789 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 PGAM2P15259 253 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 HLA-GP17693 338 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 TBPP20226 339 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 F2RP25116 425 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 PPP5CP53041 499 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 ARRDC1Q8N5I2 433 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 RSRP1Q9BUV0 290 aa12.47□□□□□ -0.41
COMMD4-207ENST00000562789 ANKRD34BA5PLL1 514 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 PRH1P02810 166 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 MYOD1P15172 320 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 LPAR6P43657 344 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 KRTAP10-11P60412 298 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 SCGB2B2Q4G0G5 96 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 TBC1D26Q86UD7 250 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 SLC25A42Q86VD7 318 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.41
COMMD4-207ENST00000562789 OR4D10Q8NGI6 311 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms