RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GOLGA3Q08378 1498 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 PLA2R1Q13018 1463 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 DNMT1P26358 1616 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 TRBV6-6A0A0A6YYG2 114 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGHV3-21A0A0B4J1V1 117 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGKV6-21A0A0C4DH24 114 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 FAM92AA1XBS5 289 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 GRIFINA4D1Z8 144 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TMEM150BA6NC51 233 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 MEIS3P1A6NDR6 274 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 C1orf196B1AJZ1 125 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 FAM25AB3EWG3 89 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 FAM25CB3EWG5 89 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 FAM25GB3EWG6 89 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TXNDC9O14530 226 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CYB5BO43169 146 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF207O43670 478 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 SRSF10O75494 262 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF682O95780 498 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGKV1-39P01597 117 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGKV3-20P01619 116 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGLV3-25P01717 112 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGHG2P01859 326 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 C1QBP02746 253 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGKV1D-39P04432 117 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IL4P05112 153 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TFPTP0C1Z6 253 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 UBBP0CG47 229 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 SMIM10L2AP0DMW4 78 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 SMIM10L2BP0DMW5 78 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CD28P10747 220 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF32P17041 273 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BOP23527 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 GATA2P23769 480 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 CNTFRP26992 372 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 BLVRBP30043 206 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BBP33778 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CA5AP35218 305 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 OPRM1P35372 400 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 OPRK1P41145 380 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CD200P41217 278 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 RPL27AP46776 148 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 CXCL12P48061 93 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ATP5G3P48201 142 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BDP58876 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 YPEL3P61236 119 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H4AP62805 103 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BCP62807 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 EIF5AP63241 154 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 BSPH1Q075Z2 132 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF616Q08AN1 781 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST2H2BEQ16778 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 DEFB115Q30KQ5 88 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 PRSS54Q6PEW0 395 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 IGFL2Q6UWQ7 119 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 MARCH3Q86UD3 253 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TMEM86AQ8N2M4 240 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 Q8N976 141 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TSTD1Q8NFU3 115 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 OR8J3Q8NGG0 315 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 LINC01560Q8TB33 94 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 THEM6Q8WUY1 208 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ITLN2Q8WWU7 325 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BHQ93079 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TMEM203Q969S6 136 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 MAGOHBQ96A72 148 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 SLC25A46Q96AG3 418 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 L3HYPDHQ96EM0 354 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 C18orf15Q96N68 181 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BNQ99877 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BMQ99879 126 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TCEAL7Q9BRU2 100 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 SHANK2-AS3Q9BTD1 123 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF471Q9BX82 626 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 TCEAL2Q9H3H9 227 aaPredicted RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 PLEKHF2Q9H8W4 249 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 EFCAB1Q9HAE3 211 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TPT1P8Q9HAU6 139 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 SND1-IT1Q9HBX3 110 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CALML5Q9NZT1 146 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 ZNF492Q9P255 531 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 RPUSD1Q9UJJ7 312 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 MCTS1Q9ULC4 181 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 CYSLTR1Q9Y271 337 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 COQ4Q9Y3A0 265 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 RBM7Q9Y580 266 aaKnown RBP1.45□□□□□ -2.18
RTF1-207ENST00000561076 RFNGQ9Y644 331 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 GON4LQ3T8J9 2241 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 SCAPERQ9BY12 1400 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 TTC37Q6PGP7 1564 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 STRCQ7RTU9 1775 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ZCCHC11Q5TAX3 1644 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 ARHGAP23Q9P227 1491 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 RAPGEF2Q9Y4G8 1499 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SETD1AO15047 1707 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 PLCH2O75038 1416 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 FMN1Q68DA7 1419 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SETD5Q9C0A6 1442 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TRAV36DV7A0A075B6V5 113 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms