RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DFFBO76075 338 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 HPRT1P00492 218 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 IFNA5P01569 189 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 IGKV1-39P01597 117 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 IGKV1-5P01602 117 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 IGKV1D-39P04432 117 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 FAM157CP0CG43 387 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 DAOP14920 347 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 OMGP23515 440 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 SULT1A1P50225 295 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 PPOXP50336 477 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 UBE2KP61086 200 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 POLR2GP62487 172 aaKnown RBP eCLIP3.64□□□□□ -1.83
SRP54-212ENST00000556992 RPL31P62899 125 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 RPP30P78346 268 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 EWSR1Q01844 656 aaKnown RBP eCLIP3.64□□□□□ -1.83
SRP54-212ENST00000556992 ZNF266Q14584 549 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 AANATQ16613 207 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 LTC4SQ16873 150 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 C17orf58Q2M2W7 97 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 CT45A1Q5HYN5 189 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 FAM201AQ5SY85 155 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 RPL7L1Q6DKI1 246 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 UQCC3Q6UW78 93 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 HEPN1Q6WQI6 88 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 H2BFWTQ7Z2G1 175 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 STX12Q86Y82 276 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 ZCCHC24Q8N2G6 241 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 TMEM252Q8N6L7 170 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 FAM216BQ8N7L0 139 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 C8orf31Q8N9H6 132 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 OR1S2Q8NGQ3 325 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 CT45A3Q8NHU0 189 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 TMED6Q8WW62 240 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 RAB1CQ92928 201 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 GNPNAT1Q96EK6 184 aaPredicted RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 CIB3Q96Q77 187 aaPredicted RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 TSNAXQ99598 290 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 GINS3Q9BRX5 216 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 MAGT1Q9H0U3 335 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 C11orf1Q9H5F2 150 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 SLC25A10Q9UBX3 287 aaPredicted RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 CACNG5Q9UF02 275 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 FBXL17Q9UF56 701 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 RPUSD1Q9UJJ7 312 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 MPDZO75970 2070 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 URB1O60287 2271 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 RP1L1Q8IWN7 2480 aaPredicted RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 ACACAQ13085 2346 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 PTPRQQ9UMZ3 2332 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 CELSR2Q9HCU4 2923 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 DOCK10Q96BY6 2186 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 POLQO75417 2590 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PDZD2O15018 2839 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PHF3Q92576 2039 aaKnown RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 IGHV3-43A0A0B4J1X8 118 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 hCG_1809904A0A1W2PP81 198 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 A0A1W2PPE2 198 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 A0A1W2PR64 198 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 A0A1W2PRV1 198 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 FAM24AA6NFZ4 105 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 C17orf98A8MV24 154 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ZNF705EA8MWA4 302 aaPredicted RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 A8MXK9 166 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 TRIM77I1YAP6 450 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 DVL1O14640 695 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 TXNL1O43396 289 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ZG16O60844 167 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 RAMP3O60896 148 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 TMEM50AO95807 157 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 HRASP01112 189 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 FGF2P09038 288 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 P0C879 139 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 IGHV3-43DP0DP04 118 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 NQO2P16083 231 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 NFYBP25208 207 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 DUTP33316 252 aaKnown RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 G6PCP35575 357 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 SULT1A2P50226 295 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PRRX1P54821 245 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PAX9P55771 341 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ATP5IP56385 69 aaPredicted RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 BRWD1-AS2P59051 145 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ERVK-16P61578 105 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 RPL30P62888 115 aaKnown RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 HBG1P69891 147 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 HBG2P69892 147 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 TNFRSF9Q07011 255 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ATP6V1FQ16864 119 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 NCR3LG1Q68D85 454 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 BTNL3Q6UXE8 466 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 IL34Q6ZMJ4 242 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 STPG2Q8N412 459 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 COMMD1Q8N668 190 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 OR52E5Q8NH55 327 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 OR4A16Q8NH70 328 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 SCGB1C1Q8TD33 95 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PCNPQ8WW12 178 aaKnown RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 IGFBPL1Q8WX77 278 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 NEUROG1Q92886 237 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms