RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 PDPK2PQ6A1A2 396 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 PTRHD1Q6GMV3 140 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 FAM173BQ6P4H8 233 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 RASSF6Q6ZTQ3 369 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 C10orf67Q8IYJ2 551 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 SLC37A2Q8TED4 501 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 RAB2BQ8WUD1 216 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 LZICQ8WZA0 190 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 PPP1R14BQ96C90 147 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 NDEL1Q9GZM8 345 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 C6orf62Q9GZU0 229 aaPredicted RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 DRC3Q9H069 523 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 SPANXA1Q9NS26 97 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 USE1Q9NZ43 259 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 V9GYQ6 96 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 LRPPRCP42704 1394 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 ABCC12Q96J65 1359 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 EVC2Q86UK5 1308 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 TTC21AQ8NDW8 1320 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 MEIKINA0A087WXM9 373 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 A0A0J9YW62 118 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 CCDC160A6NGH7 325 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 C9JCJ5 164 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 F8VZ95 297 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 H7C2G1 150 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 CCRL2O00421 344 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PLA2G10O15496 165 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 MRPS14O60783 128 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PFDN1O60925 122 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 SMIM24O75264 130 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 NIPSNAP2O75323 286 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 NDUFS6O75380 124 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 ATP5HO75947 161 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 RPP14O95059 124 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 MT-CO2P00403 227 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 NPPAP01160 153 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 APOEP02649 317 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 RPSAP08865 295 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 OCM2P0CE71 109 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 RPL28P46779 137 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 TAS2R20P59543 309 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 S100A12P80511 92 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 STX5Q13190 355 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 JOSD1Q15040 202 aaPredicted RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 SPA17Q15506 151 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 Q1T7F1 81 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 ARHGAP11BQ3KRB8 267 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PLEKHG7Q6ZR37 379 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 GPHB5Q86YW7 130 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 MBD3L1Q8WWY6 194 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 ZNF514Q96K75 400 aaPredicted RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 TIPINQ9BVW5 301 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 FAM107BQ9H098 131 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 OR52A5Q9H2C5 316 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 OR51V1Q9H2C8 321 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PARVBQ9HBI1 364 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 FKBP14Q9NWM8 211 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 STOML2Q9UJZ1 356 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PAIP2BQ9ULR5 123 aaKnown RBP0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 PRELID1Q9Y255 219 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 C15orf41Q9Y2V0 281 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 A0A1W2PP64 1363 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 FLT4P35916 1363 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 SCRIBQ14160 1630 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 ERCC6Q03468 1493 aa0.67□□□□□ -2.3
SUPT16H-206ENST00000556309 MYO3BQ8WXR4 1341 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 FHAD1B1AJZ9 1412 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 RIMS2Q9UQ26 1411 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 DCAF1Q9Y4B6 1507 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TRAV7A0A075B6U4 112 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 C1orf232A0A0U1RR37 186 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TMEM269A0A1B0GVZ9 245 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TMEM210A6NLX4 147 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 E5RI56 91 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 M0R036 132 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 CREBL2O60519 120 aaPredicted RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TNNC2P02585 160 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 RPS17P08708 135 aaKnown RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TFPTP0C1Z6 253 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 PRB4P10163 310 aaPredicted RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 IDO1P14902 403 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 IL9P15248 144 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 CCR7P32248 378 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 CD79BP40259 229 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 SLCO1A2P46721 670 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 GTF2A1P52655 376 aaPredicted RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 VBP1P61758 197 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 HLA-DRB3P79483 266 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 REEP5Q00765 189 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 FADDQ13158 208 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 LRRC26Q2I0M4 334 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 LRRC75BQ2VPJ9 315 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 OGFRL1Q5TC84 451 aaPredicted RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 CLEC6AQ6EIG7 209 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 SPOPLQ6IQ16 392 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 DCXRQ7Z4W1 244 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 NAA40Q86UY6 237 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms