RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SLC25A38Q96DW6 304 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 S100A16Q96FQ6 103 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 FYTTD1Q96QD9 318 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 SLC5A7Q9GZV3 580 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 RNF167Q9H6Y7 350 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 CCL28Q9NRJ3 127 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 SLC2A9Q9NRM0 540 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 CMYA5Q8N3K9 4069 aa7.15□□□□□ -1.27
YBX3-218ENST00000546298 SORL1Q92673 2214 aa7.15□□□□□ -1.27
YBX3-218ENST00000546298 A0A087WXM4 84 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 NPIPB5A8MRT5 1133 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 XRCC3O43542 346 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 OR2J3O76001 311 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 TRBV12-3P01733 135 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 PRH1P02810 166 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 CSN3P07498 182 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 IGHV4-30-4P0DP06 118 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 HIST1H1BP16401 226 aaKnown RBP7.14□□□□□ -1.27
YBX3-218ENST00000546298 RPL8P62917 257 aaKnown RBP7.14□□□□□ -1.27
YBX3-218ENST00000546298 C15orf32Q32M92 178 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 SSX9Q7RTT3 188 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 SPAG16Q8N0X2 631 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 Q8N1Y9 231 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 GVQW1Q8N7I0 195 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 OR5AP2Q8NGF4 316 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 CD300LFQ8TDQ1 290 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 HRASLSQ9HDD0 168 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 IFT46Q9NQC8 304 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 BET1LQ9NYM9 111 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
YBX3-218ENST00000546298 HMX3A6NHT5 357 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 TEX22C9J3V5 150 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 BMPR1BO00238 502 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 TNFSF12O43508 249 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 GGCTO75223 188 aaKnown RBP7.13□□□□□ -1.27
YBX3-218ENST00000546298 RBMXL2O75526 392 aaKnown RBP7.13□□□□□ -1.27
YBX3-218ENST00000546298 HPRT1P00492 218 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 CRYGCP07315 174 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 IL6RP08887 468 aaPredicted RBP7.13□□□□□ -1.27
YBX3-218ENST00000546298 ZNF735P0CB33 412 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 DEFA4P12838 97 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 NQO2P16083 231 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 HLA-GP17693 338 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 PSMB6P28072 239 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 BRWD1-AS2P59051 145 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 TAS2R31P59538 309 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 FXYD4P59646 89 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 HERV-K104P61576 105 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 ZNF45Q02386 682 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 MUC7Q8TAX7 377 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 TUBA4BQ9H853 241 aa7.13□□□□□ -1.27
YBX3-218ENST00000546298 CYB5BO43169 146 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 TNFAIP8O95379 198 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 PTHLHP12272 177 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
YBX3-218ENST00000546298 TAS2R46P59540 309 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 ERVK-16P61578 105 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 POU2AF1Q16633 256 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 KLK9Q2XQG4 91 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 UBE2NLQ5JXB2 153 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 TMEM69Q5SWH9 247 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 AADACL3Q5VUY0 350 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 THOC7Q6I9Y2 204 aaKnown RBP7.12□□□□□ -1.27
YBX3-218ENST00000546298 OR4A47Q6IF82 309 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 DHRS11Q6UWP2 260 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 LAX1Q8IWV1 398 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 SAMD12Q8N8I0 201 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 TSPAN14Q8NG11 270 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 DYNLRB2Q8TF09 96 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 EEF1AKMT3Q96AZ1 226 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
YBX3-218ENST00000546298 COMMD5Q9GZQ3 224 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 SLC2A8Q9NY64 477 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 TECRQ9NZ01 308 aaKnown RBP7.12□□□□□ -1.27
YBX3-218ENST00000546298 EHFQ9NZC4 300 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 THYN1Q9P016 225 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 ADAM30Q9UKF2 790 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 KLK9Q9UKQ9 250 aa7.12□□□□□ -1.27
YBX3-218ENST00000546298 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 SMIM31A0A1B0GVY4 71 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 LGALS9O00182 355 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 SULT1C2O00338 296 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 UPK2O00526 184 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 NDUFB8O95169 186 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 OR2C1O95371 312 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 FCER2P06734 321 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 FGF2P09038 288 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 LYL1P12980 280 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 AREGP15514 252 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 CTRB1P17538 263 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 S100GP29377 79 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 PRSS3P35030 304 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 ARL3P36405 182 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
YBX3-218ENST00000546298 CTRB2Q6GPI1 263 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 TMEM17Q86X19 198 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms