RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 OR4A8P0C604 315 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TCN2P20062 427 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 KLK2P20151 261 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 PSMB1P20618 241 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 RPS12P25398 132 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 PRDX3P30048 256 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 GUCA1AP43080 201 aaPredicted RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 KIR2DS2P43631 304 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TFPI2P48307 235 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RND2P52198 227 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RHOAP61586 193 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RPS14P62263 151 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 RPS23P62266 143 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 SLC35B1P78383 322 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 AKR1C1Q04828 323 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 GINS1Q14691 196 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 ELOBQ15370 118 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 OR8B8Q15620 311 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 BATFQ16520 125 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 CNIH2Q6PI25 160 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 C12orf54Q6X4T0 127 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 CLEC20AQ6ZU45 233 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 LRP11Q86VZ4 500 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 PPP1R27Q86WC6 154 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 CALHM3Q86XJ0 350 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 C11orf53Q8IXP5 236 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RNF175Q8N4F7 328 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TOMM5Q8N4H5 51 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TTC9CQ8N5M4 171 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 DEFB125Q8N687 156 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 SUMF2Q8NBJ7 301 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 KLHL30-AS1Q8NEE0 82 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 OR52E2Q8NGJ4 325 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 APH1AQ96BI3 265 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 ZMYND19Q96E35 227 aaPredicted RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 TBL1YQ9BQ87 522 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 DERL1Q9BUN8 251 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 DPY30Q9C005 99 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 COA1Q9GZY4 146 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 POLR2J3Q9H1A7 115 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 GTSF1LQ9H1H1 148 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 ATG5Q9H1Y0 275 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TMEM133Q9H2Q1 129 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 IFI27L2Q9H2X8 130 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TMEM9BQ9NQ34 198 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TNFRSF19Q9NS68 423 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 AIG1Q9NVV5 245 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TXNL4BQ9NX01 149 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 NDUFB11Q9NX14 153 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 OR1A1Q9P1Q5 309 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RFNGQ9Y644 331 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 UBR1Q8IWV7 1749 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 FRMPD3Q5JV73 1810 aa2.4□□□□□ -2.02
USP28-210ENST00000542033 AGRNO00468 2067 aa2.4□□□□□ -2.02
USP28-210ENST00000542033 DOCK1Q14185 1865 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TRAV36DV7A0A075B6V5 113 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FXYD6-FXYD2A0A087WZ82 144 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 A0A0G2JLM5 398 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ZNF816-ZNF321PA0A0X1KG74 233 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 A6NDN8 102 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 A8MU10 97 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 KLLNB2CW77 178 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 J3KT08 172 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 M0R2Z0 102 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ZNF593O00488 134 aaPredicted RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 TNFSF11O14788 317 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TAAR5O14804 337 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 YPEL1O60688 119 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ALOX12BO75342 701 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 GCM2O75603 506 aaPredicted RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 TRAPPC6AO75865 159 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 DHRS3O75911 302 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 UBL3O95164 117 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CDRT1O95170 752 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 KLF8O95600 359 aaPredicted RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 CD160O95971 181 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 MOSP00540 346 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 HLA-HP01893 362 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TRGC2P03986 189 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 P04436 131 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 KLK1P06870 262 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 AKAIN1P0CW23 69 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CYBAP13498 195 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CD99P14209 185 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 RPS4Y1P22090 263 aaKnown RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 CD34P28906 385 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 SRIP30626 198 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ARL2P36404 184 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CTRLP40313 264 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CX3CR1P49238 355 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 STC1P52823 247 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 GRB2P62993 217 aaKnown RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 ZNF266Q14584 549 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 MMDQ15546 238 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 MRPL23Q16540 153 aaKnown RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 PRR30Q53SZ7 412 aaPredicted RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 CLEC12AQ5QGZ9 265 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OTPQ5XKR4 325 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 Q6Q795 121 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ARL9Q6T311 187 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms