RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 R3HDM4Q96D70 268 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 NOL4LQ96MY1 436 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-205ENST00000541169 CLCC1Q96S66 551 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 SPIN2AQ99865 258 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 SPIN2BQ9BPZ2 258 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 ZFP57Q9NU63 452 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 NUBP2Q9Y5Y2 271 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 LINC01548A6NM66 108 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 IGHG4P01861 327 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 RPL8P62917 257 aaKnown RBP14.77□□□□□ -0.05
VPS33A-205ENST00000541169 DHODHQ02127 395 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 ZNF585BQ52M93 769 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 OR4A47Q6IF82 309 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 SGPP2Q8IWX5 399 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 MINDY2Q8NBR6 621 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 RTBDNQ9BSG5 229 aaPredicted RBP14.77□□□□□ -0.05
VPS33A-205ENST00000541169 C5orf66Q9H5L9 145 aa14.77□□□□□ -0.05
VPS33A-205ENST00000541169 TENM1Q9UKZ4 2725 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 S1PR2O95136 353 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 ANXA3P12429 323 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 PI3P19957 117 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 CD83Q01151 205 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 CFHR3Q02985 330 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 C2orf68Q2NKX9 166 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 CXorf66Q5JRM2 361 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 THOC7Q6I9Y2 204 aaKnown RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 RNF152Q8N8N0 203 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 RBMXL1Q96E39 390 aaKnown RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 ZNF430Q9H8G1 570 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 TPSG1Q9NRR2 321 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 FKBP11Q9NYL4 201 aa14.76□□□□□ -0.05
VPS33A-205ENST00000541169 FOXA2Q9Y261 457 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 TSSC4Q9Y5U2 329 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-205ENST00000541169 CRYM-AS1A6NIL9 109 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 H3BUA1 57 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 SNAPC5O75971 98 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 IL6RP08887 468 aaPredicted RBP14.75□□□□□ -0.05
VPS33A-205ENST00000541169 UCP1P25874 307 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 PPIFP30405 207 aaKnown RBP14.75□□□□□ -0.05
VPS33A-205ENST00000541169 KRTAP10-3P60369 221 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 UBE2MP61081 183 aaKnown RBP14.75□□□□□ -0.05
VPS33A-205ENST00000541169 GNB1P62873 340 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 SRPXP78539 464 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TNXAQ16473 311 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM128Q5BJH2 165 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM65Q6PI78 240 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 VKORC1L1Q8N0U8 176 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 GALNT14Q96FL9 552 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 SRSF8Q9BRL6 282 aaKnown RBP14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM222Q9H0R3 208 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 NAA60Q9H7X0 242 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM140Q9NV12 185 aa14.75□□□□□ -0.05
VPS33A-205ENST00000541169 TCRBV4S1A1TA0A5B7 111 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 UPK2O00526 184 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 BRI3O95415 125 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 KRASP01116 189 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 EGR2P11161 476 aaPredicted RBP14.74□□□□□ -0.05
VPS33A-205ENST00000541169 HLA-GP17693 338 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 PJVKQ0ZLH3 352 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 UNQ5815/PRO19632Q6UWF5 114 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 HSD17B13Q7Z5P4 300 aaPredicted RBP14.74□□□□□ -0.05
VPS33A-205ENST00000541169 ZNF329Q86UD4 541 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 SLC25A42Q86VD7 318 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 FAM219AQ8IW50 185 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 GRPEL2Q8TAA5 225 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 SRSF12Q8WXF0 261 aaKnown RBP14.74□□□□□ -0.05
VPS33A-205ENST00000541169 PHB2Q99623 299 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 COMMD5Q9GZQ3 224 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 SLA2Q9H6Q3 261 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 CACFD1Q9UGQ2 172 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 PRNDQ9UKY0 176 aa14.74□□□□□ -0.05
VPS33A-205ENST00000541169 ARPC1BO15143 372 aaKnown RBP14.73□□□□□ -0.05
VPS33A-205ENST00000541169 CDS2O95674 445 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 IGLV1-40P01703 118 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 CD28P10747 220 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 NDPQ00604 133 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 MRGPRG-AS1Q2M3A8 158 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 TRIM16LQ309B1 348 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 C19orf54Q5BKX5 351 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 SSX9Q7RTT3 188 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 H2BFWTQ7Z2G1 175 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 IL22RA2Q969J5 263 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 SEC22AQ96IW7 307 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 TP53RKQ96S44 253 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 LINC00527Q9UJ94 153 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 WSB1Q9Y6I7 421 aa14.73□□□□□ -0.05
VPS33A-205ENST00000541169 TET2Q6N021 2002 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-205ENST00000541169 MSGN1A6NI15 193 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 LYRM1O43325 122 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 NDUFB6O95139 128 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 PSMB8P28062 276 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 G6PCP35575 357 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 RPL27AP46776 148 aaKnown RBP14.72□□□□□ -0.05
VPS33A-205ENST00000541169 ECSCRQ19T08 205 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 MZT2BQ6NZ67 158 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 MRPL41Q8IXM3 137 aaKnown RBP14.72□□□□□ -0.05
VPS33A-205ENST00000541169 CENPSQ8N2Z9 138 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 LFNGQ8NES3 379 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 OR4F17Q8NGA8 305 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms