RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MARCH11A6NNE9 402 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 ARPC1BO15143 372 aaKnown RBP15.26■□□□□ 0.03
DDX55-207ENST00000540763 IGHG4P01861 327 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 OPN1MWP04001 364 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 OPN1MW2P0DN77 364 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 OPN1MW3P0DN78 364 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 EGR2P11161 476 aaPredicted RBP15.26■□□□□ 0.03
DDX55-207ENST00000540763 PPIFP30405 207 aaKnown RBP15.26■□□□□ 0.03
DDX55-207ENST00000540763 LPAR6P43657 344 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 CD83Q01151 205 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 PJVKQ0ZLH3 352 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 AKIRIN2Q53H80 203 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 OR4A47Q6IF82 309 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 TEX38Q6PEX7 206 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 VKORC1L1Q8N0U8 176 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 TMEM68Q96MH6 324 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 ZNF430Q9H8G1 570 aaPredicted RBP15.26■□□□□ 0.03
DDX55-207ENST00000540763 FBXO7Q9Y3I1 522 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 NUBP2Q9Y5Y2 271 aa15.26■□□□□ 0.03
DDX55-207ENST00000540763 C3orf85A0A1B0GTC6 90 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 CENPXA8MT69 81 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 ACTL6BO94805 426 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 CNIH1O95406 144 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 ELANEP08246 267 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
DDX55-207ENST00000540763 CD28P10747 220 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 FOXE3Q13461 319 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 ZNF846Q147U1 533 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 NDUFA11Q86Y39 141 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 RNF152Q8N8N0 203 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 MINDY2Q8NBR6 621 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 DMBX1Q8NFW5 382 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 VSIG4Q9Y279 399 aa15.25■□□□□ 0.03
DDX55-207ENST00000540763 MGAM2Q2M2H8 2515 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 CRYM-AS1A6NIL9 109 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 SERPINE2P07093 398 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 UCP1P25874 307 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 RBMS2Q15434 407 aaKnown RBP15.24■□□□□ 0.03
DDX55-207ENST00000540763 TNXAQ16473 311 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 C10orf99Q6UWK7 81 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 SSX9Q7RTT3 188 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 ZNF329Q86UD4 541 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 ABHD5Q8WTS1 349 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 TP53RKQ96S44 253 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 NAA60Q9H7X0 242 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 TMEM140Q9NV12 185 aa15.24■□□□□ 0.03
DDX55-207ENST00000540763 ATG12O94817 140 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 GNB1P62873 340 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 RPL8P62917 257 aaKnown RBP15.23■□□□□ 0.03
DDX55-207ENST00000540763 ECSCRQ19T08 205 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 TCTEX1D4Q5JR98 221 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 OR5M8Q8NGP6 311 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 GRPEL2Q8TAA5 225 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 SRSF12Q8WXF0 261 aaKnown RBP15.23■□□□□ 0.03
DDX55-207ENST00000540763 GALNT14Q96FL9 552 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 CITED2Q99967 270 aaPredicted RBP15.23■□□□□ 0.03
DDX55-207ENST00000540763 ZFP57Q9NU63 452 aa15.23■□□□□ 0.03
DDX55-207ENST00000540763 FOXA2Q9Y261 457 aaPredicted RBP15.23■□□□□ 0.03
DDX55-207ENST00000540763 TSSC4Q9Y5U2 329 aaPredicted RBP15.23■□□□□ 0.03
DDX55-207ENST00000540763 TEX13DA0A0J9YY54 714 aaPredicted RBP15.22■□□□□ 0.03
DDX55-207ENST00000540763 G3V318 75 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 M0QZ24 198 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 UPK2O00526 184 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 WIPF1O43516 503 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 PSMB8P28062 276 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 C2orf68Q2NKX9 166 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 UNQ5815/PRO19632Q6UWF5 114 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 SGPP2Q8IWX5 399 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 C11orf44Q8N8P7 122 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 SEC22AQ96IW7 307 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 TSC22D3Q99576 134 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 SPIN2AQ99865 258 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 SPIN2BQ9BPZ2 258 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 FAM103A1Q9BTL3 118 aaKnown RBP15.22■□□□□ 0.03
DDX55-207ENST00000540763 TMEM222Q9H0R3 208 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 WSB1Q9Y6I7 421 aa15.22■□□□□ 0.03
DDX55-207ENST00000540763 H3BUA1 57 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 KRASP01116 189 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 IGKV1-39P01597 117 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 IGKV1D-39P04432 117 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 HLA-GP17693 338 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 SLC6A1P30531 599 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 G6PCP35575 357 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 DHODHQ02127 395 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 CXorf66Q5JRM2 361 aaPredicted RBP15.21■□□□□ 0.03
DDX55-207ENST00000540763 LFNGQ8NES3 379 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 TMEM230Q96A57 120 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 KCNIP3Q9Y2W7 256 aa15.21■□□□□ 0.03
DDX55-207ENST00000540763 PIGBOS1A0A0B4J2F0 54 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 A0A1W2PN81 502 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 TCRBV4S1A1TA0A5B7 111 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 ADARB2-AS1A8MUL3 147 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 LYRM1O43325 122 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 NDUFB6O95139 128 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 BRI3O95415 125 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 OR5AC1P0C628 307 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 BTCP35070 178 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 CHRNA7P36544 502 aa15.2■□□□□ 0.02
DDX55-207ENST00000540763 RPL27AP46776 148 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 588.4 ms