RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FOXF2Q12947 444 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 TMEM105Q8N8V8 129 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 VAMP8Q9BV40 100 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 MRPS18CQ9Y3D5 142 aaKnown RBP11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 SLC25A40Q8TBP6 338 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 PILRBQ9UKJ0 227 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 FZR1Q9UM11 496 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 SMPD2O60906 423 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 MPV17P39210 176 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 ZNF766Q5HY98 468 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 TMEM251Q8N6I4 163 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 ST6GALNAC3Q8NDV1 305 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 PTPRBP23467 1997 aa11.56□□□□□ -0.56
SCNN1A-215ENST00000540037 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 OR8I2Q8N0Y5 310 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 MAFAQ8NHW3 353 aaPredicted RBP11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 BCL2L2Q92843 193 aaPredicted RBP11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 FAM173AQ9BQD7 235 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 GNB4Q9HAV0 340 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 OOEPA6NGQ2 149 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 MMDQ15546 238 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 OR1C1Q15619 314 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 ZNF718Q3SXZ3 478 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 UTF1Q5T230 341 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 Q8IYB0 196 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 ZBTB34Q8NCN2 500 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 RAB1CQ92928 201 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
SCNN1A-215ENST00000540037 AHRRA9YTQ3 701 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 SFTPCP11686 197 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 TCL1AP56279 114 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 FXYD3Q14802 87 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 TMEM183BQ1AE95 376 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 ACTL6BO94805 426 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 LGALS4P56470 323 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 PAFAH1B2P68402 229 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 Q8N976 141 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 M0QZK8 103 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 CXorf1O96002 111 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 PLGLB1Q02325 96 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 DOLPP1Q86YN1 238 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 MMD2Q8IY49 270 aa11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
SCNN1A-215ENST00000540037 BOD1L1Q8NFC6 3051 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 CGAP01215 116 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 MYOD1P15172 320 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 GCHFRP30047 84 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 OPRK1P41145 380 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 EFNB3Q15768 340 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 TBC1D28Q2M2D7 210 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 Q6ZVH6 145 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 TAAR6Q96RI8 345 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 KNTC1P50748 2209 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 PRSS46E5RG02 174 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
SCNN1A-215ENST00000540037 LYZL6O75951 148 aa11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 PMCHP20382 165 aa11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 TRA2AQ13595 282 aaKnown RBP eCLIP11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 PMS2CLQ68D20 193 aa11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 OR4P4Q8NGL7 312 aa11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 EAF1Q96JC9 268 aaPredicted RBP11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 DEFB127Q9H1M4 99 aa11.52□□□□□ -0.56
SCNN1A-215ENST00000540037 GFRA3O60609 400 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 SSPNQ14714 243 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 SLC35E4Q6ICL7 350 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 SIGLECL1Q8N7X8 197 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 UHRF2Q96PU4 802 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 WNT10AQ9GZT5 417 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 V9GYV3 84 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 DIRC3C9JPN6 131 aa11.52□□□□□ -0.57
SCNN1A-215ENST00000540037 GPX1P07203 203 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms