RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PLSCR3Q9NRY6 295 aa6.93□□□□□ -1.3
CCDC90B-217ENST00000530253 BTBD17A6NE02 478 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 TRIM77I1YAP6 450 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 SLC22A5O76082 557 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 THBS3P49746 956 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 RPL15P61313 204 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 HERV-K104P61576 105 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 ZBTB34Q8NCN2 500 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 DEDD2Q8WXF8 326 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 AKR1E2Q96JD6 320 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 RBM14Q96PK6 669 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 HRASLSQ9HDD0 168 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 C1RLQ9NZP8 487 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 PITPNC1Q9UKF7 332 aa6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 RBM7Q9Y580 266 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-217ENST00000530253 MGAM2Q2M2H8 2515 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 NDUFA3O95167 84 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 MOSP00540 346 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 IGKV1-16P04430 117 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 IFNA6P05013 189 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 FAM106CPP0CH98 169 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 TMEM11P17152 192 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 CNTFRP26992 372 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 CD40LGP29965 261 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 MC5RP33032 325 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 BTCP35070 178 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 PPP5CP53041 499 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 TSPAN5P62079 268 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 Q6ZSV7 163 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 Q6ZWC4 215 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 KCTD9Q7L273 389 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 C16orf82Q7Z2V1 217 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 PDPNQ86YL7 162 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 TOMM5Q8N4H5 51 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 Q8N9W7 124 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 OR51S1Q8NGJ8 323 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 OR2T10Q8NGZ9 312 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 TERB2Q8NHR7 220 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 S100ZQ8WXG8 99 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 ADTRPQ96IZ2 230 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 HSD17B10Q99714 261 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 SLC25A33Q9BSK2 321 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 CCDC32Q9BV29 185 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 SLC35D1Q9NTN3 355 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 WASHC3Q9Y3C0 194 aa6.91□□□□□ -1.3
CCDC90B-217ENST00000530253 DISC1C4P0D8 188 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 GPR31O00270 319 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 PLA2G10O15496 165 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 FGF16O43320 207 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 TNFSF12O43508 249 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 TSPAN9O75954 239 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 NDUFA7O95182 113 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 IGLV2-23P01705 113 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 APOA2P02652 100 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 AP3S2P59780 193 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 RND3P61587 244 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 IFITM3Q01628 133 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 HES1Q14469 280 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 HNF4GQ14541 408 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 ZNF846Q147U1 533 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 SURF2Q15527 256 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 DHRS7BQ6IAN0 325 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 C11orf88Q6PI97 169 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 SLC38A6Q8IZM9 456 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 Q8N2B8 174 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 C5orf56Q8N8D9 126 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 NRACQ8N912 160 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 NPBQ8NG41 125 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 OR8H1Q8NGG4 311 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 MARCH1Q8TCQ1 289 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 PRRT1Q99946 306 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 RANBP3Q9H6Z4 567 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 ZNF702PQ9H963 129 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 RAB18Q9NP72 206 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 SLC2A9Q9NRM0 540 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
CCDC90B-217ENST00000530253 TMEM89A2RUT3 159 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 SH2D7A6NKC9 451 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 NBR2O15453 112 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 RBFOX2O43251 390 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 PGLYRP1O75594 196 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 RLN1P04808 185 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 CTSDP07339 412 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 FAUP35544 74 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 F2RL1P55085 397 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 BLCAPP62952 87 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 MMDQ15546 238 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 MRGPRG-AS1Q2M3A8 158 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 SCGB2B2Q4G0G5 96 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 PHLDA2Q53GA4 152 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 ZNF57Q68EA5 555 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 IDO2Q6ZQW0 420 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 TCTEX1D2Q8WW35 142 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 BORCS5Q969J3 196 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 TMEM230Q96A57 120 aa6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 ZNF486Q96H40 463 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-217ENST00000530253 RNF5Q99942 180 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms