RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 TSNAXQ99598 290 aaKnown RBP3.08□□□□□ -1.92
C11orf54-204ENST00000527003 SPIN2AQ99865 258 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 SPIN2BQ9BPZ2 258 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 ZNF251Q9BRH9 671 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 PARP12Q9H0J9 701 aaKnown RBP3.08□□□□□ -1.92
C11orf54-204ENST00000527003 OR51J1Q9H342 316 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 COA4Q9NYJ1 87 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 FKBP11Q9NYL4 201 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 C1RLQ9NZP8 487 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 ITGB1BP2Q9UKP3 347 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 NUP50Q9UKX7 468 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 WASHC3Q9Y3C0 194 aa3.08□□□□□ -1.92
C11orf54-204ENST00000527003 PRRC2AP48634 2157 aaKnown RBP3.08□□□□□ -1.92
C11orf54-204ENST00000527003 NBPF19A0A087WUL8 3843 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 IGHV1-3A0A0C4DH29 117 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 A0A1B0GU03 582 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 A0A1W2PPE3 182 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 BTBD17A6NE02 478 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 A8MV72 311 aaPredicted RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 H0YJW9 148 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 H7C2Y5 167 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 M0QZK8 103 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SLC31A2O15432 143 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 TNFSF12O43508 249 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 FCGR3BO75015 233 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 PROP1O75360 226 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 MOSP00540 346 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 IGHV3-7P01780 117 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 CD99P14209 185 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SAA4P35542 130 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 LPAR6P43657 344 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 RRAS2P62070 204 aaPredicted RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SUPT4H1P63272 117 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 FGL1Q08830 312 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 EBI3Q14213 229 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SLC9A3R2Q15599 337 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SSX2Q16385 188 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 POU2AF1Q16633 256 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 VMA21Q3ZAQ7 101 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 CD300EQ496F6 205 aaPredicted RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 RPL39P5Q59GN2 51 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 THOC7Q6I9Y2 204 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 GSG1LQ6UXU4 331 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 RBMS3Q6XE24 437 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 H2BFWTQ7Z2G1 175 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 C16orf82Q7Z2V1 217 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 C5orf24Q7Z6I8 188 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 MOB3BQ86TA1 216 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SELENOHQ8IZQ5 122 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 ZNF383Q8NA42 475 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 TEX45Q8NA69 505 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 OR2T10Q8NGZ9 312 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 OR5R1Q8NH85 324 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 RNASE11Q8TAA1 199 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 CASTOR1Q8WTX7 329 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 CAPSLQ8WWF8 208 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 TMEM230Q96A57 120 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 TP53RKQ96S44 253 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 NABP2Q9BQ15 211 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SEC22CQ9BRL7 303 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 MRPL20Q9BYC9 149 aaKnown RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 MS4A7Q9GZW8 240 aaPredicted RBP3.07□□□□□ -1.92
C11orf54-204ENST00000527003 SLC35D1Q9NTN3 355 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 PITPNC1Q9UKF7 332 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 MMP24Q9Y5R2 645 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 ALG5Q9Y673 324 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 KIAA2026Q5HYC2 2103 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.07□□□□□ -1.922e-7■■■■□ 23.3
C11orf54-204ENST00000527003 CSPG4Q6UVK1 2322 aa3.07□□□□□ -1.92
C11orf54-204ENST00000527003 TRAV40A0A0B4J280 105 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 A0A1W2PPI3 338 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 C5orf51A6NDU8 294 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 LINC00473A8K010 186 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 FAM90A26D6RGX4 464 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 TIMM23O14925 209 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 RAMP3O60896 148 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 PFDN1O60925 122 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 MED6O75586 246 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 TSPAN9O75954 239 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 ACTL6BO94805 426 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 OR2A4O95047 310 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 VENTXO95231 258 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 CRYZL1O95825 349 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 KRASP01116 189 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 RLN2P04090 185 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 GIPP09681 153 aaPredicted RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 PET100P0DJ07 73 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 SULT1A3P0DMM9 295 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 SULT1A4P0DMN0 295 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 MALP21145 153 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 MAS1LP35410 378 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 SRP14P37108 136 aaKnown RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 BCAP31P51572 246 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 AKR1C2P52895 323 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 ATP5IP56385 69 aaPredicted RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 UBE2KP61086 200 aa3.06□□□□□ -1.92
C11orf54-204ENST00000527003 RPS16P62249 146 aaKnown RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 RPL30P62888 115 aaKnown RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 SRSF4Q08170 494 aaKnown RBP3.06□□□□□ -1.92
C11orf54-204ENST00000527003 KLRD1Q13241 179 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms