RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 TMEM91Q6ZNR0 172 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 C8orf59Q8N0T1 100 aaPredicted RBP10.9□□□□□ -0.66
CSTF3-204ENST00000524556 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 KIR2DL5AQ8N109 375 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 STPG3Q8N7X2 389 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 FBLIM1Q8WUP2 373 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 TMEM203Q969S6 136 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
CSTF3-204ENST00000524556 RAB22AQ9UL26 194 aa10.9□□□□□ -0.66
CSTF3-204ENST00000524556 LSM2Q9Y333 95 aaKnown RBP10.9□□□□□ -0.66
CSTF3-204ENST00000524556 FAT2Q9NYQ8 4349 aa10.9□□□□□ -0.67
CSTF3-204ENST00000524556 TRBV7-1A0A0A6YYK4 115 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 TMEM272A0A1B0GTI8 110 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 KBTBD11O94819 623 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 DHFRP00374 187 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 AREGP15514 252 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 HIST1H1BP16401 226 aaKnown RBP10.89□□□□□ -0.67
CSTF3-204ENST00000524556 GALP22466 123 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 PSMB6P28072 239 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 MAS1LP35410 378 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 ELLP55199 621 aaPredicted RBP10.89□□□□□ -0.67
CSTF3-204ENST00000524556 RPL30P62888 115 aaKnown RBP10.89□□□□□ -0.67
CSTF3-204ENST00000524556 ARFRP1Q13795 201 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 SPHARQ15513 63 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 Q6ZS49 121 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 PUSL1Q8N0Z8 303 aaKnown RBP10.89□□□□□ -0.67
CSTF3-204ENST00000524556 PACRGLQ8N7B6 248 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 ZNF645Q8N7E2 425 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 VSTM2AQ8TAG5 236 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 OR2A7Q96R45 310 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 SPAG8Q99932 426 aaPredicted RBP10.89□□□□□ -0.67
CSTF3-204ENST00000524556 CENPOQ9BU64 300 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 C5orf66Q9H5L9 145 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 UBQLN2Q9UHD9 624 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 PKHD1P08F94 4074 aa10.89□□□□□ -0.67
CSTF3-204ENST00000524556 GNB3P16520 340 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 CTRB1P17538 263 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 RANBP1P43487 201 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 OR2B11Q5JQS5 317 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 LIPKQ5VXJ0 399 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 CTRB2Q6GPI1 263 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 KCTD9Q7L273 389 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 TMEM167AQ8TBQ9 72 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 CXorf58Q96LI9 332 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 C8orf4Q9NR00 106 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 DNAH2Q9P225 4427 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 MRPS7Q9Y2R9 242 aaKnown RBP10.88□□□□□ -0.67
CSTF3-204ENST00000524556 UFC1Q9Y3C8 167 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 DNAH17Q9UFH2 4485 aa10.88□□□□□ -0.67
CSTF3-204ENST00000524556 IGLV11-55A0A075B6I3 123 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 MFSD2BA6NFX1 497 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 J3QRK9 145 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 MFNGO00587 321 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 TSPAN4O14817 238 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 ARL6IP5O75915 188 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 MED22Q15528 200 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 OR10R2Q8NGX6 335 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 UFD1Q92890 307 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 RBMX2Q9Y388 322 aaKnown RBP10.87□□□□□ -0.67
CSTF3-204ENST00000524556 V9GY05 133 aa10.87□□□□□ -0.67
CSTF3-204ENST00000524556 A0A075B6Q4 140 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 ERICH4A6NGS2 130 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 IGLV2-14P01704 120 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 HLA-DQB1P01920 261 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 REG1AP05451 166 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 DEFA4P12838 97 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 MYOD1P15172 320 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 HIST1H1DP16402 221 aaKnown RBP10.86□□□□□ -0.67
CSTF3-204ENST00000524556 CD36P16671 472 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
CSTF3-204ENST00000524556 GADD45AP24522 165 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 TALDO1P37837 337 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PSMD7P51665 324 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 RPS25P62851 125 aaKnown RBP10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PRR20EP86478 221 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PRR20CP86479 221 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PRR20DP86480 221 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PRR20BP86481 221 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 PRR20AP86496 221 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 SSX1Q16384 188 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 ODF3L2Q3SX64 289 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 HES5Q5TA89 166 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 ZNF502Q8TBZ5 544 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 GALNT14Q96FL9 552 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 ZNF436Q9C0F3 470 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-204ENST00000524556 MAP6D1Q9H9H5 199 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 OR2W1Q9Y3N9 320 aa10.86□□□□□ -0.67
CSTF3-204ENST00000524556 DYNC1H1Q14204 4646 aaKnown RBP10.86□□□□□ -0.67
CSTF3-204ENST00000524556 IGHV3-35A0A0C4DH35 117 aa10.85□□□□□ -0.67
CSTF3-204ENST00000524556 PTGES3LE9PB15 166 aa10.85□□□□□ -0.67
CSTF3-204ENST00000524556 RAB27BO00194 218 aa10.85□□□□□ -0.67
CSTF3-204ENST00000524556 SLC22A5O76082 557 aa10.85□□□□□ -0.67
CSTF3-204ENST00000524556 CRHBPP24387 322 aa10.85□□□□□ -0.67
CSTF3-204ENST00000524556 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms