RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 TMEM230Q96A57 120 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 TP53RKQ96S44 253 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 SLC25A21Q9BQT8 299 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-222ENST00000520948 AIFM2Q9BRQ8 373 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 COPZ2Q9P299 210 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 LINC00527Q9UJ94 153 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 C14orf166Q9Y224 244 aaKnown RBP14.24□□□□□ -0.13
VEGFA-222ENST00000520948 FBXO7Q9Y3I1 522 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 NUBP2Q9Y5Y2 271 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 C3orf85A0A1B0GTC6 90 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 H0Y980 276 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 OR2A4O95047 310 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 IGKV1-39P01597 117 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 IGKV1D-39P04432 117 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 CFHR3Q02985 330 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 PRSS8Q16651 343 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 NSUN5P1Q3KNT7 163 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 C19orf54Q5BKX5 351 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 C10orf99Q6UWK7 81 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 CENPVQ7Z7K6 275 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-222ENST00000520948 ADAD2Q8NCV1 583 aaKnown RBP14.23□□□□□ -0.13
VEGFA-222ENST00000520948 OR2A7Q96R45 310 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 BET1LQ9NYM9 111 aa14.23□□□□□ -0.13
VEGFA-222ENST00000520948 LINC00854A0A1B0GVQ3 168 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 CRYM-AS1A6NIL9 109 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 ATP6V0E1O15342 81 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 B3GALNT1O75752 331 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 KBTBD11O94819 623 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 PPIFP30405 207 aaKnown RBP14.22□□□□□ -0.13
VEGFA-222ENST00000520948 CCR6P51684 374 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 FXYD3Q14802 87 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 OXLD1Q5BKU9 147 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 OR4A47Q6IF82 309 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 OR5AU1Q8NGC0 362 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 VSTM2AQ8TAG5 236 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 R3HDM4Q96D70 268 aa14.22□□□□□ -0.13
VEGFA-222ENST00000520948 ZNF430Q9H8G1 570 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-222ENST00000520948 CENPXA8MT69 81 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 RPA2P15927 270 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 UCP1P25874 307 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 IFITM3Q01628 133 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 DHODHQ02127 395 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 SSX9Q7RTT3 188 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 MMD2Q8IY49 270 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 OR4A5Q8NH83 315 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 MRAPQ8TCY5 172 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 GLYATL2Q8WU03 294 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 GALNT14Q96FL9 552 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 SEC22AQ96IW7 307 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 NAA60Q9H7X0 242 aa14.21□□□□□ -0.13
VEGFA-222ENST00000520948 TEX13DA0A0J9YY54 714 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-222ENST00000520948 PSMB11A5LHX3 300 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 MARCH11A6NNE9 402 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 UPK2O00526 184 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 LYRM1O43325 122 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 FBXO24O75426 580 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 UPK1BO75841 260 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 NDUFB6O95139 128 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 FGF2P09038 288 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 CD28P10747 220 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 SUPT4H1P63272 117 aaKnown RBP14.2□□□□□ -0.14
VEGFA-222ENST00000520948 CD83Q01151 205 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 RBMS2Q15434 407 aaKnown RBP14.2□□□□□ -0.14
VEGFA-222ENST00000520948 SP6Q3SY56 376 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 REC114Q7Z4M0 266 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 MINDY2Q8NBR6 621 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 GON7Q9BXV9 100 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 TMEM222Q9H0R3 208 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 PARP11Q9NR21 331 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 TBC1D24Q9ULP9 559 aa14.2□□□□□ -0.14
VEGFA-222ENST00000520948 TRAV3A0A0B4J244 114 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 G3V318 75 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 CDS2O95674 445 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 KRASP01116 189 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 OR5AC1P0C628 307 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 MAS1LP35410 378 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 G6PCP35575 357 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 AKIRIN2Q53H80 203 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 ZNF329Q86UD4 541 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 ARPC1AQ92747 370 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 FAM103A1Q9BTL3 118 aaKnown RBP14.19□□□□□ -0.14
VEGFA-222ENST00000520948 TMEM140Q9NV12 185 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 WSB1Q9Y6I7 421 aa14.19□□□□□ -0.14
VEGFA-222ENST00000520948 TNCP24821 2201 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 TRAV41A0A0B4J266 112 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 CREBL2O60519 120 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-222ENST00000520948 IGHG4P01861 327 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 SERPINE2P07093 398 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 TMEM187Q14656 261 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 TNXAQ16473 311 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 TMEM128Q5BJH2 165 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 ASPHD1Q5U4P2 390 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 SGPP2Q8IWX5 399 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 COMMD1Q8N668 190 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 DMBX1Q8NFW5 382 aa14.18□□□□□ -0.14
VEGFA-222ENST00000520948 E7EUB6 86 aa14.17□□□□□ -0.14
VEGFA-222ENST00000520948 CNIH1O95406 144 aa14.17□□□□□ -0.14
VEGFA-222ENST00000520948 IGLV1-40P01703 118 aa14.17□□□□□ -0.14
VEGFA-222ENST00000520948 OR9G9P0C7N8 305 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms