RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SMIM19Q96E16 107 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 PELI1Q96FA3 418 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RRNAD1Q96FB5 475 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TBX5Q99593 518 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 NEURL2Q9BR09 285 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 THAP7Q9BT49 309 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 PARD6GQ9BYG4 376 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 CST11Q9H112 138 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MIXL1Q9H2W2 232 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 OR51M1Q9H341 326 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GEMIN7Q9H840 131 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 LINC00574Q9H8X3 128 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RHOFQ9HBH0 211 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RETNQ9HD89 108 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GPR84Q9NQS5 396 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 SDHAF2Q9NX18 166 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 FAM206AQ9NX38 181 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 SIGLEC8Q9NYZ4 499 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MTCH1Q9NZJ7 389 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 ABRACLQ9P1F3 81 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 KIAA1456Q9P272 454 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 COMMD3Q9UBI1 195 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 NUFIP1Q9UHK0 495 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GNG8Q9UK08 70 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TBC1D24Q9ULP9 559 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RBMX2Q9Y388 322 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 NUBP2Q9Y5Y2 271 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 HSPG2P98160 4391 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 A0A087WW49 117 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 TRAV41A0A0B4J266 112 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 FBLL1A6NHQ2 334 aaKnown RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM212A6NML5 194 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 NUPL2O15504 423 aaKnown RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 SELENOFO60613 162 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 BRI3O95415 125 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 IFNA10P01566 189 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 HLA-DRB1P01911 266 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 UCHL1P09936 223 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 ALOX5APP20292 161 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 RAB3BP20337 219 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 FUT6P51993 359 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 HCCSP53701 268 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 CD81P60033 236 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 ASAH1Q13510 395 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 ALKBH1Q13686 389 aaKnown RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 PSG3Q16557 428 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 C5orf64Q2M2E5 130 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 C17orf58Q2M2W7 97 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 BSXQ3C1V8 233 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 ACTBL2Q562R1 376 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 IDNKQ5T6J7 187 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 SFXN4Q6P4A7 337 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 Q6ZSR3 168 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 FAM220AQ7Z4H9 259 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 RDH10Q8IZV5 341 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 YIPF7Q8N8F6 280 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 C8orf31Q8N9H6 132 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 OR52B4Q8NGK2 314 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 OR5AK2Q8NH90 309 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 KCNG3Q8TAE7 436 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 C15orf40Q8WUR7 153 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 BORCS8Q96FH0 119 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 PGLYRP3Q96LB9 341 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 OR5B12Q96R08 314 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 AMELYQ99218 206 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 SDHCQ99643 169 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 NABP2Q9BQ15 211 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 HSPB9Q9BQS6 159 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 HINT2Q9BX68 163 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 SRRQ9GZT4 340 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 PBOV1Q9GZY1 135 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 KLK15Q9H2R5 256 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 SLA2Q9H6Q3 261 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 RANGRFQ9HD47 186 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 HEYLQ9NQ87 328 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-207ENST00000520168 PLSCR3Q9NRY6 295 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 GPR173Q9NS66 373 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 IDI2-AS1Q9NZ38 188 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 PSG11Q9UQ72 335 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 V9GYH0 126 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 V9GYS6 101 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 DNAH17Q9UFH2 4485 aa3.71□□□□□ -1.82
SDCBP-207ENST00000520168 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 LINC00587B1AMM8 73 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 NPIPB11E5RHQ5 1161 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 F8VVB4 439 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 F8VWA3 439 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 M0R036 132 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 ATP6V0E1O15342 81 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 HPGDSO60760 199 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 MED6O75586 246 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR2C1O95371 312 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR2H2O95918 312 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 HLA-DQB1P01920 261 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 SLC2A2P11168 524 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 IL7P13232 177 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms