RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CD40LGP29965 261 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 CDX1P47902 265 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 CCR6P51684 374 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 HERV-K104P61576 105 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 GNB1P62873 340 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SUPT4H1P63272 117 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 CX3CL1P78423 397 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SCGB2B2Q4G0G5 96 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 ACTBL2Q562R1 376 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 DEFB121Q5J5C9 76 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SPANXN2Q5MJ10 180 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF66Q6ZN08 573 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 C19orf35Q6ZS72 473 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 TBC1D26Q86UD7 250 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 PUSL1Q8N0Z8 303 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 OR5M8Q8NGP6 311 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 TERB2Q8NHR7 220 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 C15orf40Q8WUR7 153 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 TCTEX1D2Q8WW35 142 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 RAX2Q96IS3 184 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 HARBI1Q96MB7 349 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 OR5B12Q96R08 314 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 RNF5Q99942 180 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 FAM103A1Q9BTL3 118 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SLC2A9Q9NRM0 540 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 RABL2AQ9UBK7 228 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 RABL2BQ9UNT1 228 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 GPR132Q9UNW8 380 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 A0A0G2JRQ6 117 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 LINC00854A0A1B0GVQ3 168 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 A0A1W2PN81 502 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 GPR31O00270 319 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 CA2P00918 260 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 RPA2P15927 270 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 PSMB8P28062 276 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 CHRNA7P36544 502 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 RND3P61587 244 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 TSPAN5P62079 268 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 RTL8BQ17RB0 113 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 IZUMO4Q1ZYL8 232 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 SP6Q3SY56 376 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 PPP1R27Q86WC6 154 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 SPAG16Q8N0X2 631 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 GDPD1Q8N9F7 314 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 GRPEL2Q8TAA5 225 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 C4orf3Q8WVX3 66 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 P2RX4Q99571 388 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 HSD17B10Q99714 261 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 KLK15Q9H2R5 256 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF355PQ9NSJ1 428 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 ZMAT5Q9UDW3 170 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 FLVCR2Q9UPI3 526 aa6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 FOXA2Q9Y261 457 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-213ENST00000509357 SHOXO15266 292 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 SPDEFO95238 335 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 CTSDP07339 412 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 OR9G9P0C7N8 305 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 P0C879 139 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 F2RP25116 425 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 LGALS7P47929 136 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 RAB9AP51151 201 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 PIGPP57054 158 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 UBE2KP61086 200 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF45Q02386 682 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 KIAA0141Q14154 515 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 FXYD3Q14802 87 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 MEF2DQ14814 521 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 POU2AF1Q16633 256 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 C11orf87Q6NUJ2 197 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF562Q6V9R5 426 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 LINC00299Q6ZSB3 139 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 SSX9Q7RTT3 188 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 SLC38A6Q8IZM9 456 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 TOMM5Q8N4H5 51 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 TCTEX1D1Q8N7M0 179 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 RNF152Q8N8N0 203 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ZBTB34Q8NCN2 500 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 OR11H1Q8NG94 326 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ARPC1AQ92747 370 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ADTRPQ96IZ2 230 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 UBE2E2Q96LR5 201 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 MS4A10Q96PG2 267 aa6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 ZNF430Q9H8G1 570 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-213ENST00000509357 CRYM-AS1A6NIL9 109 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 SEC14L6B5MCN3 397 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 TEX22C9J3V5 150 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 MPPED1O15442 326 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 SLC22A5O76082 557 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 IGLV1-40P01703 118 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 IFNA6P05013 189 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 OR5AC1P0C628 307 aa6.79□□□□□ -1.32
PDLIM5-213ENST00000509357 APELAP0DMC3 54 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms