RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 IGHV3-7P01780 117 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 OR10J1P30954 320 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 CDC34P49427 236 aaPredicted RBP7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 CNN1P51911 297 aaKnown RBP7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SPINK9Q5DT21 86 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SP5Q6BEB4 398 aaPredicted RBP7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 OR2T10Q8NGZ9 312 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 OR5R1Q8NH85 324 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SPSB1Q96BD6 273 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 VSIRQ9H7M9 311 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 OR6C3Q9NZP0 311 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 ZNF391Q9UJN7 358 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SHISA9B4DS77 424 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SNAI2O43623 268 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 IGFBP3P17936 291 aaPredicted RBP7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 BRS3P32247 399 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 EDDM3BP56851 147 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 ICAM4Q14773 271 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 KCNG3Q8TAE7 436 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 GATAD1Q8WUU5 269 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 OR5P3Q8WZ94 311 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 TP73-AS1Q9UF72 201 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 TENM4Q6N022 2769 aa7.26□□□□□ -1.25
LIMCH1-209ENST00000509277 CCL25O15444 150 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 GCGP01275 180 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 OPN1MWP04001 364 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 OPN1MW2P0DN77 364 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 OPN1MW3P0DN78 364 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 CCL1P22362 96 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 CBLN1P23435 193 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 RPS4Y2Q8TD47 263 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 R3HDM4Q96D70 268 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SLC35E1Q96K37 410 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 CXXC4Q9H2H0 198 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SERTAD4Q9NUC0 356 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 MTCH1Q9NZJ7 389 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 IGHV1-46P01743 117 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 APOBEC3AP31941 199 aaPredicted RBP7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 AARDQ4LEZ3 155 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SLC35E3Q7Z769 313 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 OSR2Q8N2R0 312 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 FAM19A2Q8N3H0 131 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 STPG4Q8N801 248 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 OR5A2Q8NGI9 324 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 AQP3Q92482 292 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 TMED3Q9Y3Q3 217 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 KMT2BQ9UMN6 2715 aaPredicted RBP7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 DEFB108AA8MXU0 73 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 IQCF6A8MYZ5 107 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 CHST1O43916 411 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 CD1AP06126 327 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 FSTP19883 344 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 TMEM50BP56557 158 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 TAS2R46P59540 309 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 TMEM241Q24JQ0 296 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SPATA45Q537H7 98 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SIGLECL1Q8N7X8 197 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 H1FXQ92522 213 aaKnown RBP7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 SPSB4Q96A44 273 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 MANBALQ9NQG1 85 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 ACANP16112 2415 aa7.25□□□□□ -1.25
LIMCH1-209ENST00000509277 UBE2L5PA0A1B0GUS4 154 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 IGSF23A1L1A6 192 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 ZNF737O75373 536 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 MELTFP08582 738 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 GZMHP20718 246 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PRB3Q04118 309 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 ATP6V1FQ16864 119 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 OR4A47Q6IF82 309 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 C1QL4Q86Z23 238 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 FAM58AQ8N1B3 248 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PERPQ96FX8 193 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PECRQ9BY49 303 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 RPRMQ9NS64 109 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 KIAA1456Q9P272 454 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PRRC2AP48634 2157 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 ODAMA1E959 279 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 F6UZH7 168 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 DEGS1O15121 323 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 GYPAP02724 150 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PPOXP50336 477 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 ZNF90Q03938 601 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 TFF3Q07654 80 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 FFAR4Q5NUL3 377 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 OR51G1Q8NGK1 321 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 HIPK2Q9H2X6 1198 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 TECRQ9NZ01 308 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 KCNS2Q9ULS6 477 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 MAP1LC3B2A6NCE7 125 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 OR5B21A6NL26 309 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 B4DEV8 164 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 DIRC3C9JPN6 131 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 PLA2G2AP14555 144 aa7.24□□□□□ -1.25
LIMCH1-209ENST00000509277 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms