RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IMMP1LQ96LU5 166 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 GGACTQ9BVM4 153 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 CA7P43166 264 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 FHITP49789 147 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 TM4SF5O14894 197 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 CECR9P0C854 216 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 ZP1P60852 638 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 CX3CL1P78423 397 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 RELQ04864 619 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 SPATA45Q537H7 98 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 FAM53AQ6NSI3 398 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 OSR1Q8TAX0 266 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 CGB1A6NKQ9 187 aa14.02□□□□□ -0.16
PCDHA1-203ENST00000504120 UCP1P25874 307 aa14.02□□□□□ -0.16
PCDHA1-203ENST00000504120 PDLIM4P50479 330 aa14.02□□□□□ -0.16
PCDHA1-203ENST00000504120 DDB2Q92466 427 aa14.02□□□□□ -0.16
PCDHA1-203ENST00000504120 PHLDA3Q9Y5J5 127 aa14.02□□□□□ -0.16
PCDHA1-203ENST00000504120 VENTXO95231 258 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 KLRB1Q12918 225 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 EEF1AKMT3Q96AZ1 226 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 SFRP2Q96HF1 295 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 FOXH1O75593 365 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 RPL39P5Q59GN2 51 aa14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 MRPL14Q6P1L8 145 aaKnown RBP14.02□□□□□ -0.17
PCDHA1-203ENST00000504120 REPIN1Q9BWE0 567 aaKnown RBP14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 CEP290O15078 2479 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 IGLV3-12A0A075B6K2 115 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 GDF9O60383 454 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 C2orf83Q53S99 150 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 TMEM106BQ9NUM4 274 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 TBX6O95947 436 aaPredicted RBP14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 NPPCP23582 126 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 TCF24Q7RTU0 167 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 IGFBP3P17936 291 aaPredicted RBP14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 NAT1P18440 290 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 RNFT1Q5M7Z0 435 aa14.01□□□□□ -0.17
PCDHA1-203ENST00000504120 H3BVH4 76 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 CDK2AP1O14519 115 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 ATXN7O15265 892 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 ZNF324O75467 553 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 SRIP30626 198 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 ATP5J2P56134 94 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 C1QTNF12Q5T7M4 302 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 C12orf54Q6X4T0 127 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 CYP2G1PQ6ZSU1 146 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 RPRMQ9NS64 109 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 A0A1B0GTI1 187 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 C9orf172C9J069 976 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 IL6RP08887 468 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 CDX1P47902 265 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 ACSF3Q4G176 576 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 SMUG1Q53HV7 270 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 ZNF385CQ66K41 422 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 NPCDR1Q9BY65 106 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 FOLR2P14207 255 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 COTL1Q14019 142 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 RRN3P1Q2M238 152 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 EIF3GO75821 320 aaKnown RBP eCLIP14□□□□□ -0.17
PCDHA1-203ENST00000504120 LTBRP36941 435 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 FAM90A1Q86YD7 464 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 HIST1H2BAQ96A08 127 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 RAB37Q96AX2 223 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 RTBDNQ9BSG5 229 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 AKIRIN1Q9H9L7 192 aaPredicted RBP14□□□□□ -0.17
PCDHA1-203ENST00000504120 UQCR10Q9UDW1 63 aa14□□□□□ -0.17
PCDHA1-203ENST00000504120 NUDT3O95989 172 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 RP1P56715 2156 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 TSPOP30536 169 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 TMEM70Q9BUB7 260 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 SAPCD1Q5SSQ6 148 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 RAX2Q96IS3 184 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 RLFQ13129 1914 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 GFRA3O60609 400 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 IL4P05112 153 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 LINC00305Q7Z4B0 112 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 IFI27L2Q9H2X8 130 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 PDCD11Q14690 1871 aaKnown RBP13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 TRGC1P0CF51 173 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 AMMECR1LQ6DCA0 310 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 GOLT1AQ6ZVE7 132 aa13.99□□□□□ -0.17
PCDHA1-203ENST00000504120 RSPO4Q2I0M5 234 aaPredicted RBP13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 CENPWQ5EE01 88 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 SMIM12Q96EX1 92 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 IGHV2OR16-5A0A0B4J2B6 119 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 A0A0G2JMM0 328 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 A0A1W2PPB8 328 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 A0A1W2PRS3 328 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 KIR3DP1A8MWS1 328 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 RRHO14718 337 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 GPX1P07203 203 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 FAM27E3Q08E93 113 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 CHODLQ9H9P2 273 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 MSGN1A6NI15 193 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 UBE2L6O14933 153 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms