RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 MZT2BQ6NZ67 158 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 SSX9Q7RTT3 188 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 CENPSQ8N2Z9 138 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 STPG2Q8N412 459 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 DMBX1Q8NFW5 382 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 GALNT14Q96FL9 552 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
USP11-212ENST00000497179 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 ZNF430Q9H8G1 570 aaPredicted RBP11.39□□□□□ -0.59
USP11-212ENST00000497179 PARP11Q9NR21 331 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 TMEM140Q9NV12 185 aa11.39□□□□□ -0.59
USP11-212ENST00000497179 HAX1O00165 279 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 ARPC1BO15143 372 aaKnown RBP11.38□□□□□ -0.59
USP11-212ENST00000497179 KRASP01116 189 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 FGF2P09038 288 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 AKR1C4P17516 323 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 G6PCP35575 357 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
USP11-212ENST00000497179 DHODHQ02127 395 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 SLC25A42Q86VD7 318 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 GLYATL2Q8WU03 294 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 CHPT1Q8WUD6 406 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 ARPC1AQ92747 370 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 SEC22AQ96IW7 307 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 TSC22D3Q99576 134 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 FBXO7Q9Y3I1 522 aa11.38□□□□□ -0.59
USP11-212ENST00000497179 UPK2O00526 184 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 CDS2O95674 445 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
USP11-212ENST00000497179 MAS1LP35410 378 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 GNB1P62873 340 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 CFHR3Q02985 330 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 TMEM187Q14656 261 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 FXYD3Q14802 87 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 C20orf85Q9H1P6 137 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 FLVCR2Q9UPI3 526 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 KCNIP3Q9Y2W7 256 aa11.37□□□□□ -0.59
USP11-212ENST00000497179 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 FAM240BA0A1B0GVZ2 78 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 ATG12O94817 140 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 CNIH1O95406 144 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 IGKV1-5P01602 117 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 TCRBP04435 133 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 P0C879 139 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 ANXA3P12429 323 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 DEFA1P59665 94 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 DEFA3P59666 94 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
USP11-212ENST00000497179 TNXAQ16473 311 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
USP11-212ENST00000497179 C3orf56Q8N813 242 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 SPATA3Q8NHX4 192 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 LHFPL5Q8TAF8 219 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 ABHD5Q8WTS1 349 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 TMEM56-RWDD3S4R434 201 aa11.36□□□□□ -0.59
USP11-212ENST00000497179 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 ACTL6BO94805 426 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 HLA-GP17693 338 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 VDAC1P21796 283 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 SLC35B1P78383 322 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 SRPXP78539 464 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 C10orf55Q5SWW7 151 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
USP11-212ENST00000497179 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 SRSF12Q8WXF0 261 aaKnown RBP11.35□□□□□ -0.59
USP11-212ENST00000497179 RBPMSQ93062 196 aaKnown RBP11.35□□□□□ -0.59
USP11-212ENST00000497179 CITED1Q99966 193 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 FAM103A1Q9BTL3 118 aaKnown RBP11.35□□□□□ -0.59
USP11-212ENST00000497179 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
USP11-212ENST00000497179 G3V318 75 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 FBXO24O75426 580 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 SFT2D2O95562 160 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 OR9G9P0C7N8 305 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 ANXA7P20073 488 aaKnown RBP11.34□□□□□ -0.59
USP11-212ENST00000497179 VAMP1P23763 118 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 PPIFP30405 207 aaKnown RBP11.34□□□□□ -0.59
USP11-212ENST00000497179 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
USP11-212ENST00000497179 AKR1C2P52895 323 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
USP11-212ENST00000497179 TMEM267Q0VDI3 215 aaPredicted RBP11.34□□□□□ -0.59
USP11-212ENST00000497179 ECSCRQ19T08 205 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 C10orf99Q6UWK7 81 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 H2BFWTQ7Z2G1 175 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms