RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ZNF818PQ6ZRF7 136 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 SLC25A42Q86VD7 318 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 VKORC1L1Q8N0U8 176 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 OR4A5Q8NH83 315 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 DYNC2LI1Q8TCX1 351 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 CASTOR1Q8WTX7 329 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 SRSF12Q8WXF0 261 aaKnown RBP5.42□□□□□ -1.54
TOP3A-207ENST00000493648 USMG5Q96IX5 58 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 RHOVQ96L33 236 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 ABHD1Q96SE0 405 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 SPIN2AQ99865 258 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 SPIN2BQ9BPZ2 258 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 ZNF430Q9H8G1 570 aaPredicted RBP5.42□□□□□ -1.54
TOP3A-207ENST00000493648 COA4Q9NYJ1 87 aa5.42□□□□□ -1.54
TOP3A-207ENST00000493648 DPPA5A6NC42 116 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 CCDC160A6NGH7 325 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 LINC01619G3V211 115 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 GABARAPH6UMI1 98 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 RAMP3O60896 148 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 KBTBD11O94819 623 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 IGHV3-11P01762 117 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 HSPB1P04792 205 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 LGALS1P09382 135 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 OR9G9P0C7N8 305 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 APELAP0DMC3 54 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 TBPP20226 339 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 F2RP25116 425 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 LPAR6P43657 344 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 UCP3P55916 312 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 MRPS10P82664 201 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 SSBP1Q04837 148 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 FHL3Q13643 280 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 RNASE12Q5GAN4 147 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 RNASE10Q5GAN6 216 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 C9orf66Q5T8R8 295 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 ASPHD1Q5U4P2 390 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 OR4A47Q6IF82 309 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 SSX9Q7RTT3 188 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 PUSL1Q8N0Z8 303 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 TMEM229BQ8NBD8 167 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 DMBX1Q8NFW5 382 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 OR51H1Q8NH63 302 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 OR52I2Q8NH67 350 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 ISOC1Q96CN7 298 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 DGCR14Q96DF8 476 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 DIRAS2Q96HU8 199 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 FYTTD1Q96QD9 318 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 RSRP1Q9BUV0 290 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 TINAGL1Q9GZM7 467 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 C6orf62Q9GZU0 229 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 ALX4Q9H161 411 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 MIXL1Q9H2W2 232 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 PLEKHA2Q9HB19 425 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 RANGRFQ9HD47 186 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 HRASLSQ9HDD0 168 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 BET1LQ9NYM9 111 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 CCDC59Q9P031 241 aaKnown RBP5.41□□□□□ -1.54
TOP3A-207ENST00000493648 KLK11Q9UBX7 282 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 MTFP1Q9UDX5 166 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
TOP3A-207ENST00000493648 NOTCH3Q9UM47 2321 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 FABP12A6NFH5 140 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 SEC14L6B5MCN3 397 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 H3BMQ9 156 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 M0QYG6 137 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 UPK2O00526 184 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 OVOL1O14753 267 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 DHFRP00374 187 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 PRB2P02812 416 aaPredicted RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 CD3DP04234 171 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 RLN1P04808 185 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 HOXD3P31249 432 aaPredicted RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 RPL27AP46776 148 aaKnown RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 INSL3P51460 131 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 TAS2R19P59542 299 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 ERVK-16P61578 105 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 DGCR2P98153 550 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 ATP5G2Q06055 141 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 EGFEM1PQ0D2K5 195 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 IL18Q14116 193 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 POU2AF1Q16633 256 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 PHLDA2Q53GA4 152 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 LAX1Q8IWV1 398 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 SLC38A6Q8IZM9 456 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 ARRDC1Q8N5I2 433 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 ADAD2Q8NCV1 583 aaKnown RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 MCFD2Q8NI22 146 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 MRAPQ8TCY5 172 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 DCUN1D4Q92564 292 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 COMMD5Q9GZQ3 224 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 FXYD6Q9H0Q3 95 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 SLC2A9Q9NRM0 540 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 COMMD9Q9P000 198 aa5.4□□□□□ -1.54
TOP3A-207ENST00000493648 RSL24D1Q9UHA3 163 aaKnown RBP5.4□□□□□ -1.54
TOP3A-207ENST00000493648 CEPT1Q9Y6K0 416 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms