RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 COMMD1Q8N668 190 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 OR11H1Q8NG94 326 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 OR1S1Q8NH92 325 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 SFXN5Q8TD22 340 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 SGTBQ96EQ0 304 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 OLFM3Q96PB7 478 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 OR4C12Q96R67 309 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 VAT1Q99536 393 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 BCL2L14Q9BZR8 327 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 INIPQ9NRY2 104 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 C20orf96Q9NUD7 363 aaPredicted RBP1.95□□□□□ -2.1
ITGB1-214ENST00000488427 TAS2R5Q9NYW4 299 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 MAT2BQ9NZL9 334 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 A0A075B6Q4 140 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 M0R1X1 148 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 MYL12BO14950 172 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 EIF3HO15372 352 aaKnown RBP eCLIP1.94□□□□□ -2.1
ITGB1-214ENST00000488427 SLC16A7O60669 478 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 KLHL2O95198 593 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 MMP7P09237 267 aaPredicted RBP1.94□□□□□ -2.1
ITGB1-214ENST00000488427 PRSS3P35030 304 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 BMI1P35226 326 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 RAP1GDS1P52306 607 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 PSMD4P55036 377 aaKnown RBP1.94□□□□□ -2.1
ITGB1-214ENST00000488427 SLC35B1P78383 322 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 RESP18Q5W5W9 173 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 DRAM1Q8N682 238 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 OTUD6BQ8N6M0 293 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 SLC25A29Q8N8R3 303 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 LINC00301Q8NCQ3 95 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 OR10W1Q8NGF6 305 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
ITGB1-214ENST00000488427 TNFRSF14Q92956 283 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 RPEQ96AT9 228 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 RCN3Q96D15 328 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 MRPL48Q96GC5 212 aaKnown RBP1.94□□□□□ -2.1
ITGB1-214ENST00000488427 EBPLQ9BY08 206 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 PARVBQ9HBI1 364 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 CCNB1IP1Q9NPC3 277 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 MCUBQ9NWR8 336 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 FBXL3Q9UKT7 428 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 COMMD3-BMI1R4GMX3 469 aa1.94□□□□□ -2.1
ITGB1-214ENST00000488427 A0A1W2PNN7 141 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 J3QRE1 110 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 XRCC2O43543 280 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 SMC2O95347 1197 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 FSTL3O95633 263 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 IFNA21P01568 189 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 IFNA5P01569 189 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 IFNA17P01571 189 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 C8GP07360 202 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 SNRPAP09012 282 aaKnown RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 PGA4P0DJD7 388 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 PGA3P0DJD8 388 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 MT1HL1P0DM35 61 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 UCHL3P15374 230 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 GZMMP51124 257 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 OR2B6P58173 313 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 LRRC74AQ0VAA2 488 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 KCNJ8Q15842 424 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ATP6AP1LQ52LC2 224 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 TRMT12Q53H54 448 aaKnown RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 TMEM69Q5SWH9 247 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 FAM201AQ5SY85 155 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 FAM45BPQ6NSW5 357 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 PPP1R2P3Q6NXS1 205 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 BZW1Q7L1Q6 419 aaKnown RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 DAZ4Q86SG3 579 aaKnown RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 SLC30A7Q8NEW0 376 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ZNF420Q8TAQ5 688 aaPredicted RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 FAM45AQ8TCE6 357 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 C4orf3Q8WVX3 66 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ZNF75AQ96N20 296 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 BIRC8Q96P09 236 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 OR2V2Q96R30 315 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 MS4A8Q9BY19 250 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 NDEL1Q9GZM8 345 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ABCG5Q9H222 651 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ANKRA2Q9H9E1 313 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 DAZ1Q9NQZ3 744 aaKnown RBP1.93□□□□□ -2.1
ITGB1-214ENST00000488427 PARP11Q9NR21 331 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 RMND1Q9NWS8 449 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 RWDD2AQ9UIY3 292 aa1.93□□□□□ -2.1
ITGB1-214ENST00000488427 ZNF99A8MXY4 864 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-214ENST00000488427 PSPHP1O15172 72 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 PFDN6O15212 129 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 UBL3O95164 117 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 IGLV1-51P01701 117 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 CCL2P13500 99 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 RAB9AP51151 201 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 DYNLT1P63172 113 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 SARNPP82979 210 aaKnown RBP1.92□□□□□ -2.1
ITGB1-214ENST00000488427 HES1Q14469 280 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 TBC1D28Q2M2D7 210 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 CEACAM16Q2WEN9 425 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 GCSAMLQ5JQS6 135 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 NOXRED1Q6NXP6 359 aa1.92□□□□□ -2.1
ITGB1-214ENST00000488427 TBPL2Q6SJ96 375 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms