RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 CNIH2Q6PI25 160 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
ABCF3-212ENST00000478288 TMEM167AQ8TBQ9 72 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 OR2A7Q96R45 310 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 DCUN1D5Q9BTE7 237 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 Q9H521 79 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 RETNQ9HD89 108 aa9.78□□□□□ -0.84
ABCF3-212ENST00000478288 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 PPP5D1E7EU14 171 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 RPL27AP46776 148 aaKnown RBP9.77□□□□□ -0.85
ABCF3-212ENST00000478288 RPL30P62888 115 aaKnown RBP9.77□□□□□ -0.85
ABCF3-212ENST00000478288 MSMO1Q15800 293 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 CDNFQ49AH0 187 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 NR2C2APQ86WQ0 139 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 DEFB125Q8N687 156 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 FYTTD1Q96QD9 318 aaKnown RBP9.77□□□□□ -0.85
ABCF3-212ENST00000478288 ATG5Q9H1Y0 275 aa9.77□□□□□ -0.85
ABCF3-212ENST00000478288 IGKV1D-13A0A0B4J2D9 117 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 TMEM213A2RRL7 107 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 MRPS14O60783 128 aaKnown RBP9.76□□□□□ -0.85
ABCF3-212ENST00000478288 IL6RP08887 468 aaPredicted RBP9.76□□□□□ -0.85
ABCF3-212ENST00000478288 FGF2P09038 288 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 IGKV1-13P0DP09 117 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
ABCF3-212ENST00000478288 CTRB1P17538 263 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 CBLN1P23435 193 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 NFYAP23511 347 aaPredicted RBP9.76□□□□□ -0.85
ABCF3-212ENST00000478288 PSMB6P28072 239 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 ZNF66Q6ZN08 573 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 VKORC1L1Q8N0U8 176 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 OR4A5Q8NH83 315 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 EEF1AKMT3Q96AZ1 226 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 ST6GALNAC5Q9BVH7 336 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 ANXA10Q9UJ72 324 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
ABCF3-212ENST00000478288 ELF5Q9UKW6 265 aaPredicted RBP9.76□□□□□ -0.85
ABCF3-212ENST00000478288 TRBV7-1A0A0A6YYK4 115 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 A0A1B0GW64 132 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 DPPA5A6NC42 116 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 HMX3A6NHT5 357 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 NOTOA8MTQ0 251 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.857e-8■□□□□ 11
ABCF3-212ENST00000478288 OR2C1O95371 312 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 ATP6V1G2O95670 118 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 HRASP01112 189 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 FGF9P31371 208 aaPredicted RBP9.75□□□□□ -0.85
ABCF3-212ENST00000478288 ARL3P36405 182 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 RPL8P62917 257 aaKnown RBP9.75□□□□□ -0.85
ABCF3-212ENST00000478288 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 FAM106AQ4KMX7 169 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 ZNF57Q68EA5 555 aaPredicted RBP9.75□□□□□ -0.85
ABCF3-212ENST00000478288 C22orf42Q6IC83 251 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 MARC2Q969Z3 335 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
ABCF3-212ENST00000478288 CXorf58Q96LI9 332 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 CNBD2Q96M20 576 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 BET1LQ9NYM9 111 aa9.75□□□□□ -0.85
ABCF3-212ENST00000478288 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 TRAV25A0A0B4J276 109 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 TMEM235A6NFC5 223 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 E7EUB6 86 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 HLA-AP01891 365 aaKnown RBP9.74□□□□□ -0.85
ABCF3-212ENST00000478288 SCAND1P57086 179 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 GNG2P59768 71 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 GABARAPL2P60520 117 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 TPRA1Q86W33 373 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 MFSD4AQ8N468 514 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 NUDCD2Q8WVJ2 157 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 SRSF8Q9BRL6 282 aaKnown RBP9.74□□□□□ -0.85
ABCF3-212ENST00000478288 RAB26Q9ULW5 256 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 SPATA2Q9UM82 520 aa9.74□□□□□ -0.85
ABCF3-212ENST00000478288 J3QRK9 145 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 SSX5O60225 188 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 NDUFB8O95169 186 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 C8orf88P0DMB2 117 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 AREGP15514 252 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 HLA-GP17693 338 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 EDN2P20800 178 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 UBE2UQ5VVX9 321 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 C19orf35Q6ZS72 473 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 ZBTB34Q8NCN2 500 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
ABCF3-212ENST00000478288 GGTLC1Q9BX51 225 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms