RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DCAF16Q9NXF7 216 aa2.82□□□□□ -1.96
UBR3-209ENST00000477461 MBD2Q9UBB5 411 aa2.82□□□□□ -1.96
UBR3-209ENST00000477461 EXTL2Q9UBQ6 330 aa2.82□□□□□ -1.96
UBR3-209ENST00000477461 MRPS7Q9Y2R9 242 aaKnown RBP2.82□□□□□ -1.96
UBR3-209ENST00000477461 USP9YO00507 2555 aaPredicted RBP2.82□□□□□ -1.96
UBR3-209ENST00000477461 YLPM1P49750 1951 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 KIAA2026Q5HYC2 2103 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 SPG11Q96JI7 2443 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 IGKV1D-17A0A075B6S4 117 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 IGHV3-35A0A0C4DH35 117 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 TMEM30CPA0ZSE6 113 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 FABP12A6NFH5 140 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CEACAM18A8MTB9 384 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 SERPINE3A8MV23 424 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 SOCS1O15524 211 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CA11O75493 328 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 FSTL3O95633 263 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 GLAP06280 429 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PGAM2P15259 253 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 HIST1H1DP16402 221 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 USF1P22415 310 aaPredicted RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 CDK2P24941 298 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PTBP1P26599 531 aaKnown RBP eCLIP2.81□□□□□ -1.96
UBR3-209ENST00000477461 PRSS3P35030 304 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 RBMXP38159 391 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 CBX5P45973 191 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 INPP1P49441 399 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 EFNB2P52799 333 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 EDDM3BP56851 147 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 TAS2R20P59543 309 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 BPIFB3P59826 476 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 GNB2P62879 340 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 MRPS10P82664 201 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 ZNF45Q02386 682 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CBX3Q13185 183 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 MADCAM1Q13477 382 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 EDDM3AQ14507 147 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ZNF846Q147U1 533 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ATXN7L3Q14CW9 347 aaPredicted RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 GRK1Q15835 563 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CDNFQ49AH0 187 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PYDC2Q56P42 97 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 STUMQ69YW2 141 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PYHIN1Q6K0P9 492 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 Q6P435 159 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 METAP1DQ6UB28 335 aaPredicted RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 FAM159AQ6UWV7 190 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 LYPD2Q6UXB3 125 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 C2orf66Q6UXQ4 117 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 LINC00299Q6ZSB3 139 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 C6orf201Q7Z4U5 140 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 SNX29P2Q8IUI4 249 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 BPIFB2Q8N4F0 458 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 FAM216BQ8N7L0 139 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 OR4M1Q8NGD0 313 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ANGPTL6Q8NI99 470 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 C10orf105Q8TEF2 133 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 SLC25A38Q96DW6 304 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 SDSLQ96GA7 329 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ARHGAP5-AS1Q96IT6 56 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 TSC22D3Q99576 134 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CMSS1Q9BQ75 279 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 NDUFAF3Q9BU61 184 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PECRQ9BY49 303 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 BPESC1Q9GZL8 116 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CHST6Q9GZX3 395 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 MIXL1Q9H2W2 232 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PATZ1Q9HBE1 687 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 TMEM165Q9HC07 324 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 ESM1Q9NQ30 184 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 IFT46Q9NQC8 304 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 KCNIP1Q9NZI2 227 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 KAAG1Q9UBP8 84 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 CLN8Q9UBY8 286 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 Q9UF83 564 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 TRAPPC2LQ9UL33 140 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 PTPN13Q12923 2485 aa2.81□□□□□ -1.96
UBR3-209ENST00000477461 HELZ2Q9BYK8 2649 aaKnown RBP2.81□□□□□ -1.96
UBR3-209ENST00000477461 BOD1L1Q8NFC6 3051 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 NBEAQ8NFP9 2946 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 UBR5O95071 2799 aaPredicted RBP2.8□□□□□ -1.96
UBR3-209ENST00000477461 DSCAML1Q8TD84 2053 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 MEIKINA0A087WXM9 373 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 TRGV10A0A0A0MS01 117 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 KIR2DS1A0A191URI9 304 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 hADV38S2A0JD32 116 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 TMEM235A6NFC5 223 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 K7N7A8 449 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 SULT1C2O00338 296 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 MFNGO00587 321 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 FOXH1O75593 365 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 RBBP9O75884 186 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 IGHV2-5P01817 119 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 TFF1P04155 84 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms