RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 IGKV3-11P04433 115 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 MEF2BQ02080 365 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-209ENST00000475639 CYB561D1Q8N8Q1 229 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 RND1Q92730 232 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 A0A1W2PQM1 296 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 WNT9BO14905 357 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 RBX1P62877 108 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 LYZL2Q7Z4W2 148 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 OR4C13Q8NGP0 309 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 OR1P1Q8NH06 330 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 RAX2Q96IS3 184 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 FOXC2Q99958 501 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-209ENST00000475639 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.92□□□□□ -0.826e-8■■■□□ 16.7
U2AF1-209ENST00000475639 ZNF324BQ6AW86 544 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-209ENST00000475639 PGPA6NDG6 321 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 K7N7A8 449 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 SOCS1O15524 211 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 NDUFB4O95168 129 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 PF4V1P10720 104 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 RPL31P62899 125 aaKnown RBP9.91□□□□□ -0.82
U2AF1-209ENST00000475639 PRICKLE4Q2TBC4 344 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 MOGAT3Q86VF5 341 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 LYPD6Q86Y78 171 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 DNAJB12Q9NXW2 375 aaKnown RBP9.91□□□□□ -0.82
U2AF1-209ENST00000475639 S1PR2O95136 353 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 CCL2P13500 99 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 CA7P43166 264 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 TNFSF10P50591 281 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 NPFFR1Q9GZQ6 430 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 VCX2Q9H322 139 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 RFNGQ9Y644 331 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 IGHV3OR16-12A0A075B7B8 117 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 IGKV3OR2-268A0A0C4DH90 116 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 CDX4O14627 284 aaPredicted RBP9.91□□□□□ -0.82
U2AF1-209ENST00000475639 TYMSP04818 313 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 LINC00869P0C866 280 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 TSPOP30536 169 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 MC5RP33032 325 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 PSMG4Q5JS54 123 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 LPAR2Q9HBW0 351 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 A1L4Q6 167 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 FSTP19883 344 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 CCL7P80098 99 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 OR8B12Q8NGG6 310 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 TMEM45BQ96B21 275 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
U2AF1-209ENST00000475639 C1orf100Q5SVJ3 147 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 SPSB3Q6PJ21 355 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 SF3B5Q9BWJ5 86 aaKnown RBP9.9□□□□□ -0.82
U2AF1-209ENST00000475639 C7orf71A4D174 169 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 GDF9O60383 454 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 SSTR5P35346 364 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 COL10A1Q03692 680 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 GAB4Q2WGN9 574 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 MBNL2Q5VZF2 373 aaKnown RBP9.9□□□□□ -0.82
U2AF1-209ENST00000475639 F11RQ9Y624 299 aaKnown RBP9.9□□□□□ -0.82
U2AF1-209ENST00000475639 PXMP4Q9Y6I8 212 aa9.9□□□□□ -0.82
U2AF1-209ENST00000475639 KIR2DL5BA0A0G2JN68 375 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 KIR2DL5BA0A0G2JPC4 375 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.83
U2AF1-209ENST00000475639 GALNSP34059 522 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 FBXW9Q5XUX1 488 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 KIR2DL5AQ8N109 375 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 TEX29Q8N6K0 151 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 KIR3DL3Q8N743 410 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 OR2Y1Q8NGV0 311 aa9.9□□□□□ -0.83
U2AF1-209ENST00000475639 RNASE8Q8TDE3 154 aaKnown RBP9.9□□□□□ -0.83
U2AF1-209ENST00000475639 ANOS1P23352 680 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 RND2P52198 227 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 DLX6P56179 175 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 VAX1Q5SQQ9 334 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 C1orf194Q5T5A4 169 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 FHL5Q5TD97 284 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 SHISA5Q8N114 240 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 PTPMT1Q8WUK0 201 aaPredicted RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 GPR35Q9HC97 309 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 PLPP3O14495 311 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 HPRT1P00492 218 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 FGF5P12034 268 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 ICAM4Q14773 271 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM196Q5HYL7 178 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM170BQ5T4T1 132 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 C1QL3Q5VWW1 255 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 MMD2Q8IY49 270 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 MRPL16Q9NX20 251 aaKnown RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 CACNA1HO95180 2353 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 IFNL4K9M1U5 179 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 IGHV4-34P06331 123 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 APELAP0DMC3 54 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 GPR6P46095 362 aaPredicted RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM95Q3KNT9 176 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms