RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 LYRM9A8MSI8 78 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 GYG2O15488 501 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ACTL6BO94805 426 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 IFNGP01579 166 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 MAS1P04201 325 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ISG15P05161 165 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 FCER2P06734 321 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 RPL5P46777 297 aaKnown RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 GSSP48637 474 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 SMIM11AP58511 58 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 UBE2KP61086 200 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 PSME3P61289 254 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 TAGLNQ01995 201 aaKnown RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ASAH1Q13510 395 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 FCN2Q15485 313 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 RRN3P1Q2M238 152 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 DNAL1Q4LDG9 190 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 Q6ZNX1 250 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 TPRA1Q86W33 373 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 OR10K1Q8NGX5 313 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 SPSB1Q96BD6 273 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ADAT3Q96EY9 351 aaPredicted RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 MRPS26Q9BYN8 205 aaKnown RBP4.31□□□□□ -1.72
HDAC3-206ENST00000471968 Q9H521 79 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ST3GAL6Q9Y274 331 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 ENPP4Q9Y6X5 453 aa4.31□□□□□ -1.72
HDAC3-206ENST00000471968 TRAV2A0A0B4J234 112 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 MFNGO00587 321 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 MAGEB4O15481 346 aaPredicted RBP4.3□□□□□ -1.72
HDAC3-206ENST00000471968 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 DIRAS1O95057 198 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 TNFAIP8O95379 198 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 DEFA4P12838 97 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 M6PRP20645 277 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 S100A1P23297 94 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 PRDX6P30041 224 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 IFNGR2P38484 337 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 ACTR3P61158 418 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 ROM1Q03395 351 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 TSPAN31Q12999 210 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 GK3PQ14409 553 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 IRF3Q14653 427 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 SAMD4BQ5PRF9 694 aaKnown RBP4.3□□□□□ -1.72
HDAC3-206ENST00000471968 THOC7Q6I9Y2 204 aaKnown RBP4.3□□□□□ -1.72
HDAC3-206ENST00000471968 ELP2Q6IA86 826 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 TRAT1Q6PIZ9 186 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 CADM3Q8N126 398 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 OR4C16Q8NGL9 310 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 OR10AC1Q8NH08 325 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 NSL1Q96IY1 281 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 C7orf50Q9BRJ6 194 aaKnown RBP4.3□□□□□ -1.72
HDAC3-206ENST00000471968 ADI1Q9BV57 179 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 TSSK6Q9BXA6 273 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 RBM38Q9H0Z9 239 aaKnown RBP4.3□□□□□ -1.72
HDAC3-206ENST00000471968 TAGLN3Q9UI15 199 aa4.3□□□□□ -1.72
HDAC3-206ENST00000471968 IGHV3-66A0A0C4DH42 116 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 CBY3A6NI87 242 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 MARCH11A6NNE9 402 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 ZNF701M0R085 212 aaPredicted RBP4.29□□□□□ -1.72
HDAC3-206ENST00000471968 CASQ2O14958 399 aaPredicted RBP4.29□□□□□ -1.72
HDAC3-206ENST00000471968 DENRO43583 198 aaKnown RBP4.29□□□□□ -1.72
HDAC3-206ENST00000471968 SULT1C4O75897 302 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 DHFRP00374 187 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 SMIM18P0DKX4 95 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 HIST1H1BP16401 226 aaKnown RBP4.29□□□□□ -1.72
HDAC3-206ENST00000471968 RRM2P31350 389 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 HSPA13P48723 471 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 NDUFA5Q16718 116 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 OGFRL1Q5TC84 451 aaPredicted RBP4.29□□□□□ -1.72
HDAC3-206ENST00000471968 SIGIRRQ6IA17 410 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 GLYATQ6IB77 296 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 RPL13AP3Q6NVV1 102 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 UTS2BQ765I0 119 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 GNPDA2Q8TDQ7 276 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 APOL4Q9BPW4 351 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 IFT22Q9H7X7 185 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 PLGRKTQ9HBL7 147 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 KCNIP1Q9NZI2 227 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 STEAP1Q9UHE8 339 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 RAB26Q9ULW5 256 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 LY96Q9Y6Y9 160 aa4.29□□□□□ -1.72
HDAC3-206ENST00000471968 hCG_2014768A0A024R1R8 64 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 IGLV11-55A0A075B6I3 123 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 TRAV14DV4A0A0A6YYC5 116 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 K7EQG2 157 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 M0QYG6 137 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 FXYD1O00168 92 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 NME4O00746 187 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 GNGT2O14610 69 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 GEMIN2O14893 280 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms