RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 VSTM2AQ8TAG5 236 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 TMEM167AQ8TBQ9 72 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 TMEM56Q96MV1 263 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 AIFM2Q9BRQ8 373 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 OR51J1Q9H342 316 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 ZNF430Q9H8G1 570 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-206ENST00000470241 BEX1Q9HBH7 125 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 BET1LQ9NYM9 111 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 RNF114Q9Y508 228 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
SMC1A-206ENST00000470241 TRAV6A0A075B6T7 132 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 A0A1B0GUS0 222 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 UPK2O00526 184 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 KCNAB3O43448 404 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 SFT2D2O95562 160 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 P0C879 139 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 EGR2P11161 476 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-206ENST00000470241 VAMP1P23763 118 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 UBE2MP61081 183 aaKnown RBP8.32□□□□□ -1.08
SMC1A-206ENST00000470241 ERVK-16P61578 105 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 ZNF562Q6V9R5 426 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 MMD2Q8IY49 270 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 SELENOHQ8IZQ5 122 aaKnown RBP8.32□□□□□ -1.08
SMC1A-206ENST00000470241 DUSP18Q8NEJ0 188 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 OR4A5Q8NH83 315 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-206ENST00000470241 PALMDQ9NP74 551 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 NUDT15Q9NV35 164 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 LINC00527Q9UJ94 153 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 FBXO7Q9Y3I1 522 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 NUBP2Q9Y5Y2 271 aa8.32□□□□□ -1.08
SMC1A-206ENST00000470241 FBN1P35555 2871 aaKnown RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 AP4M1O00189 453 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ATP6V0E1O15342 81 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 CREBL2O60519 120 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 IGF1P05019 195 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 OR4E1P0C645 316 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 OR9G9P0C7N8 305 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ANXA3P12429 323 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 MYOD1P15172 320 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 MECP2P51608 486 aaKnown RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 GNB1P62873 340 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 DHRS2Q13268 280 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 FXYD3Q14802 87 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ANKRD55Q3KP44 614 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 TMEM268Q5VZI3 342 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ZNF695Q8IW36 515 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 FOXRED2Q8IWF2 684 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 STPG2Q8N412 459 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 KLHDC1Q8N7A1 406 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 WIPF2Q8TF74 440 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ARPC1AQ92747 370 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 RBPMSQ93062 196 aaKnown RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 IL22RA2Q969J5 263 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 FAM103A1Q9BTL3 118 aaKnown RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ALX4Q9H161 411 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-206ENST00000470241 PARP11Q9NR21 331 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
SMC1A-206ENST00000470241 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 E7EUB6 86 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 HAX1O00165 279 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 CNIH1O95406 144 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 SPNP16150 400 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 HLA-GP17693 338 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 AKR1C2P52895 323 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 CRIP2P52943 208 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-206ENST00000470241 RAB25P57735 213 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 RPL8P62917 257 aaKnown RBP8.3□□□□□ -1.08
SMC1A-206ENST00000470241 CFHR3Q02985 330 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 DCTN2Q13561 401 aaKnown RBP8.3□□□□□ -1.08
SMC1A-206ENST00000470241 TNXAQ16473 311 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 IZUMO4Q1ZYL8 232 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 C4orf46Q504U0 113 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 C10orf99Q6UWK7 81 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 H2BFWTQ7Z2G1 175 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 LYG2Q86SG7 212 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 LGI3Q8N145 548 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 LRTM2Q8N967 370 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 SGMS2Q8NHU3 365 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 GRPEL2Q8TAA5 225 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 SRSF12Q8WXF0 261 aaKnown RBP8.3□□□□□ -1.08
SMC1A-206ENST00000470241 NSG2Q9Y328 171 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 WSB1Q9Y6I7 421 aa8.3□□□□□ -1.08
SMC1A-206ENST00000470241 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 A0A0B4J293 547 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 A0A1B0GW64 132 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms