RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TRBV12-3P01733 135 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 PRH1P02810 166 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 GP9P14770 177 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 SPNP16150 400 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 TAS2R46P59540 309 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 RHOGP84095 191 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 EXOSC2Q13868 293 aaKnown RBP7.8□□□□□ -1.16
SF3A3-204ENST00000462258 AADACL3Q5VUY0 350 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 OR4A47Q6IF82 309 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF343Q6P1L6 599 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 HAPLN4Q86UW8 402 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 FAM223AQ8IWN6 122 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 OR5H2Q8NGV7 314 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 OR51H1Q8NH63 302 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 GIMAP1Q8WWP7 306 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 BORCS5Q969J3 196 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 FYTTD1Q96QD9 318 aaKnown RBP7.8□□□□□ -1.16
SF3A3-204ENST00000462258 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 FXYD6Q9H0Q3 95 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 AKIP1Q9NQ31 210 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 COMMD3Q9UBI1 195 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 PEF1Q9UBV8 284 aaKnown RBP7.8□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF257Q9Y2Q1 563 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 DPPA5A6NC42 116 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 HMX3A6NHT5 357 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 GABARAPO95166 117 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 APOA1P02647 267 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 PMP2P02689 132 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 RLN1P04808 185 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF735P0CB33 412 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 PRSS3P35030 304 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 MAS1LP35410 378 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 SYNJ2BPP57105 145 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 TAS2R31P59538 309 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 RPL8P62917 257 aaKnown RBP7.79□□□□□ -1.16
SF3A3-204ENST00000462258 RPEL1Q2QD12 228 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 C19orf35Q6ZS72 473 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 SLC25A42Q86VD7 318 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 TTC9CQ8N5M4 171 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 OR9G4Q8NGQ1 327 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 MOB3AQ96BX8 217 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF2Q9BSG1 426 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-204ENST00000462258 BET1LQ9NYM9 111 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
SF3A3-204ENST00000462258 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
SF3A3-204ENST00000462258 TRBV9A0A0B4J1U6 114 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 A0A1B0GW64 132 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 HPGDSO60760 199 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 OR2J3O76001 311 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 S1PR2O95136 353 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 HPRT1P00492 218 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 IGLV1-51P01701 117 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 IL6RP08887 468 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-204ENST00000462258 MYOD1P15172 320 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 NQO2P16083 231 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 HLA-GP17693 338 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 NAT1P18440 290 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 HRH1P35367 487 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 RFX2P48378 723 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 ATP5G2Q06055 141 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-204ENST00000462258 POU2AF1Q16633 256 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 C15orf32Q32M92 178 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 SNX29P2Q8IUI4 249 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 OR4A5Q8NH83 315 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 GPX8Q8TED1 209 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 CMTM3Q96MX0 182 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 AIFM2Q9BRQ8 373 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 NAA50Q9GZZ1 169 aaKnown RBP7.78□□□□□ -1.16
SF3A3-204ENST00000462258 SCPEP1Q9HB40 452 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 HRASLSQ9HDD0 168 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 TMEM140Q9NV12 185 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 COMMD9Q9P000 198 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 ADAM30Q9UKF2 790 aa7.78□□□□□ -1.16
SF3A3-204ENST00000462258 SMIM31A0A1B0GVY4 71 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 E7EUB6 86 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 BMPR1BO00238 502 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 DHFRP00374 187 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 NHLRC4P0CG21 123 aaPredicted RBP7.77□□□□□ -1.17
SF3A3-204ENST00000462258 AREGP15514 252 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 ELK1P19419 428 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 HLA-DMAP28067 261 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 GNRHRP30968 328 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 RCVRNP35243 200 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 RORCP51449 518 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 CTF1Q16619 201 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 CD300LFQ8TDQ1 290 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 AP3S1Q92572 193 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 ASCL2Q99929 193 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 MRPS26Q9BYN8 205 aaKnown RBP7.77□□□□□ -1.17
SF3A3-204ENST00000462258 PLEKHA2Q9HB19 425 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 SLC2A9Q9NRM0 540 aa7.77□□□□□ -1.17
SF3A3-204ENST00000462258 STAB2Q8WWQ8 2551 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.76□□□□□ -1.17
SF3A3-204ENST00000462258 CGB1A6NKQ9 187 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 MARCH11A6NNE9 402 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms