RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KIR2DS2P43631 304 aa8.78□□□□□ -1
PKP4-206ENST00000452162 ATP5J2P56134 94 aa8.78□□□□□ -1
PKP4-206ENST00000452162 TMEM30BQ3MIR4 351 aa8.78□□□□□ -1
PKP4-206ENST00000452162 TMEM88Q6PEY1 159 aa8.78□□□□□ -1
PKP4-206ENST00000452162 KRTAP1-3Q8IUG1 177 aa8.78□□□□□ -1
PKP4-206ENST00000452162 CBLN2Q8IUK8 224 aa8.78□□□□□ -1
PKP4-206ENST00000452162 CLRN3Q8NCR9 226 aa8.78□□□□□ -1
PKP4-206ENST00000452162 KIAA1456Q9P272 454 aa8.78□□□□□ -1
PKP4-206ENST00000452162 F8P00451 2351 aa8.78□□□□□ -1
PKP4-206ENST00000452162 NKX6-3A6NJ46 265 aa8.78□□□□□ -1
PKP4-206ENST00000452162 IGHV4-39P01824 125 aa8.78□□□□□ -1
PKP4-206ENST00000452162 BPIFB3P59826 476 aa8.78□□□□□ -1
PKP4-206ENST00000452162 LRRC75A-AS1Q8N1F1 130 aa8.78□□□□□ -1
PKP4-206ENST00000452162 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
PKP4-206ENST00000452162 ZNF251Q9BRH9 671 aa8.78□□□□□ -1
PKP4-206ENST00000452162 QTRT1Q9BXR0 403 aaKnown RBP8.78□□□□□ -1
PKP4-206ENST00000452162 SMDT1Q9H4I9 107 aa8.78□□□□□ -1
PKP4-206ENST00000452162 MED13LQ71F56 2210 aa8.78□□□□□ -1
PKP4-206ENST00000452162 SAA2-SAA4A0A096LPE2 208 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 TRAV1-1A0A0B4J248 108 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 TRAV38-1A0A0B4J264 116 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 A0A1W2PPE3 182 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 TMEM178BH3BS89 294 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 LY6HO94772 140 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 SAA2P0DJI9 122 aaPredicted RBP8.77□□□□□ -1.01
PKP4-206ENST00000452162 OR8G2PQ6IF36 304 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 SVIPQ8NHG7 77 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 TAF15Q92804 592 aaKnown RBP eCLIP8.77□□□□□ -1.01
PKP4-206ENST00000452162 S1PR3Q99500 378 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 RARRES2Q99969 163 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 EGLN1Q9GZT9 426 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 SLC35B3Q9H1N7 401 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 SAP30LQ9HAJ7 183 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 RPRMQ9NS64 109 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 PRELID3BQ9Y3B1 194 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 UBE2L5PA0A1B0GUS4 154 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 RBFOX3A6NFN3 312 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 FCN3O75636 299 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 MMP23AO75900 390 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 HBE1P02100 147 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 NFYBP25208 207 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 OR2B8PP59922 312 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 ATP6V1FQ16864 119 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 CENPVQ7Z7K6 275 aaPredicted RBP8.77□□□□□ -1.01
PKP4-206ENST00000452162 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 DYNLRB1Q9NP97 96 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 RPUSD1Q9UJJ7 312 aaKnown RBP8.77□□□□□ -1.01
PKP4-206ENST00000452162 TIMM9Q9Y5J7 89 aa8.77□□□□□ -1.01
PKP4-206ENST00000452162 hADV38S2A0JD32 116 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 CEBPZOSA8MTT3 80 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 TMPRSS2O15393 492 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 THBS3P49746 956 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 SERF2P84101 59 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ZNF726P1Q15940 193 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 PDLIM3Q53GG5 364 aaPredicted RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 Q5PR19 223 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 PRAMEF5Q5TYX0 476 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 C1orf87Q8N0U7 546 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 WFDC11Q8NEX6 87 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 OR4S2Q8NH73 311 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 RBMXL1Q96E39 390 aaKnown RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 TMEM147Q9BVK8 224 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ZANQ9Y493 2812 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 C15orf62A8K5M9 175 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ARG1P05089 322 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 NQO2P16083 231 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 PPOXP50336 477 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ERVK-16P61578 105 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 MRPS11P82912 194 aaKnown RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 MEF2CQ06413 473 aaPredicted RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 ICAM4Q14773 271 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 VWC2Q2TAL6 325 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 FAM122CQ6P4D5 195 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 ZNF383Q8NA42 475 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 CLDND2Q8NHS1 167 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 MBD3L1Q8WWY6 194 aa8.76□□□□□ -1.01
PKP4-206ENST00000452162 SLC25A10Q9UBX3 287 aaPredicted RBP8.76□□□□□ -1.01
PKP4-206ENST00000452162 TEP1Q99973 2627 aaKnown RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 PPIAL4EA0A075B759 164 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 PPIAL4DF5H284 164 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 PPIAL4FP0DN26 164 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 NDUFB7P17568 137 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 GNG10P50151 68 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 SPCS3P61009 180 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 GNB2P62879 340 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 RELBQ01201 579 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 HFEQ30201 348 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 TMEM41BQ5BJD5 291 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 SLC25A48Q6ZT89 311 aaKnown RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 SSX9Q7RTT3 188 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 VKORC1L1Q8N0U8 176 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms