RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CALCBP10092 127 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SLC2A2P11168 524 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 HIST1H1BP16401 226 aaKnown RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 FUT1P19526 365 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 GABRR1P24046 479 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 AQP1P29972 269 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SLC6A6P31641 620 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 CEACAM3P40198 252 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SLC18A1P54219 525 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PRKCDQ05655 676 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 FABP9Q0Z7S8 132 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PLA2G7Q13093 441 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 EBI3Q14213 229 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 MEP1BQ16820 701 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SPANXN4Q5MJ08 99 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 GFI1BQ5VTD9 330 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF660Q6AZW8 331 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF613Q6PF04 617 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PET117Q6UWS5 81 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 NRMQ8IXM6 262 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PUSL1Q8N0Z8 303 aaKnown RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 BATF2Q8N1L9 274 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 Q8NAQ8 132 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 OR8D4Q8NGM9 314 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PFN4Q8NHR9 129 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 RPEQ96AT9 228 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 OTULINQ96BN8 352 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 CCDC124Q96CT7 223 aaKnown RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM56Q96MV1 263 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 HINT2Q9BX68 163 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF436Q9C0F3 470 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 RGCCQ9H4X1 137 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM38AQ9H6F2 299 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PARP11Q9NR21 331 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 GPR173Q9NS66 373 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF107Q9UII5 783 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 OR52A1Q9UKL2 312 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 EMCNQ9ULC0 261 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SLC7A11Q9UPY5 501 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 POMPQ9Y244 141 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 KLHDC2Q9Y2U9 406 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 RHBDD3Q9Y3P4 386 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM56-RWDD3S4R434 201 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 A0A0G2JND7 137 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 A0A1B0GV72 72 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 A0A1B0GW15 77 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 A0A1W2PQL4 384 aaPredicted RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 FABP12A6NFH5 140 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ANKRD30BLA7E2S9 258 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 M0R135 149 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 M0R143 59 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SLC1A7O00341 560 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GGCTO75223 188 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF737O75373 536 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ADAP1O75689 374 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GABARAPO95166 117 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 HLA-DQA2P01906 255 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 FCGR1AP12314 374 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 HLA-GP17693 338 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GZMHP20718 246 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SERPINA2P20848 420 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MYL9P24844 172 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MAS1LP35410 378 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ETV6P41212 452 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 RAB5CP51148 216 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 RPL19P84098 196 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 FAM3AP98173 230 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 DEFA5Q01523 94 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 CDK5R1Q15078 307 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 CTF1Q16619 201 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ECSCRQ19T08 205 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 IZUMO4Q1ZYL8 232 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ALG10Q5BKT4 473 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MESTQ5EB52 335 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 PYY3Q5JQD4 70 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM236Q5W0B7 351 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GSG1LQ6UXU4 331 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF497Q6ZNH5 498 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 VTCN1Q7Z7D3 282 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MRPL52Q86TS9 123 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 OR6V1Q8N148 313 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 DNAAF1Q8NEP3 725 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GJC3Q8NFK1 279 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 OR4D6Q8NGJ1 314 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 OR13A1Q8NGR1 328 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 OR13C5Q8NGS8 318 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 OR5B3Q8NH48 314 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MCFD2Q8NI22 146 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 DYNC2LI1Q8TCX1 351 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 PCNPQ8WW12 178 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ACOT12Q8WYK0 555 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 MAL2Q969L2 176 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SMIM12Q96EX1 92 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SAT2Q96F10 170 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms