RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TTRP02766 147 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PGAM2P15259 253 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RPL7P18124 248 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ATF1P18846 271 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 EVI2AP22794 236 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TSFMP43897 325 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PTH2RP49190 550 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 B3GALT5-AS1P59052 145 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SLC35A1P78382 337 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RGNQ15493 299 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF684Q5T5D7 378 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SBSNQ6UWP8 590 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GOLT1AQ6ZVE7 132 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TCEANCQ8N8B7 351 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OR2G3Q8NGZ4 309 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PIFOQ8TCI5 191 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 WFDC5Q8TCV5 224 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 VN1R17PQ8TDU5 208 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GEMIN6Q8WXD5 167 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GPR146Q96CH1 333 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ACY3Q96HD9 319 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SLC25A33Q9BSK2 321 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZBP1Q9H171 429 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SLC35B3Q9H1N7 401 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TCEAL2Q9H3H9 227 aaPredicted RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RNF114Q9Y508 228 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 MYOFQ9NZM1 2061 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TRAV38-1A0A0B4J264 116 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TRBV5-4A0A0C4DH59 114 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TRBV5-5A0A0J9YX44 114 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 FABP5P3A8MUU1 101 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SMKR1H3BMG3 65 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF207O43670 478 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CLDN14O95500 239 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 S100A3P33764 101 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SNCAP37840 140 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 C9orf139Q6ZV77 190 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 MAPKAPK5-AS1Q8N8E1 139 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF689Q96CS4 500 aaPredicted RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SCN8AQ9UQD0 1980 aa4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CHD3Q12873 2000 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF106Q9H2Y7 1883 aaKnown RBP4.79□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TRBV6-7A0A0A0MS04 114 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CXorf51AA0A1B0GTR3 108 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 EEF1E1-BLOC1S5C9J1V9 151 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 H7C1C5 153 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 K7EPK0 472 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 K7EQS6 105 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SAP18O00422 153 aaKnown RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GEMIN2O14893 280 aaKnown RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 MRPS12O15235 138 aaKnown RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 MOSP00540 346 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PGA4P0DJD7 388 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PGA5P0DJD9 388 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CCL5P13501 91 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 LCN6P62502 163 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PRDX4Q13162 271 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 RUNX3Q13761 415 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OR7A5Q15622 319 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TMEM183BQ1AE95 376 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TIGITQ495A1 244 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 AADACL3Q5VUY0 350 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 Q6ZVH6 145 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GTF2H5Q6ZYL4 71 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 HOGA1Q86XE5 327 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 GKN2Q86XP6 184 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 FAM71E2Q8N5Q1 922 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 STPG4Q8N801 248 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OR5AK2Q8NH90 309 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CIB3Q96Q77 187 aaPredicted RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OR51I2Q9H344 312 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 MRPL27Q9P0M9 148 aaKnown RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 C19orf25Q9UFG5 118 aaPredicted RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TRAV1-2A0A0B4J238 106 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 A0A0B4J2A0 478 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF705FA8MVS1 300 aaPredicted RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 SPRY3O43610 288 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 LYPD3O95274 346 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF705DP0CH99 300 aaPredicted RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 ZNF705BP0CI00 300 aaPredicted RBP4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 IGHV4-31P0DP07 118 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 CD70P32970 193 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 S100A10P60903 97 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 P2RY6Q15077 328 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 DUSP5Q16690 384 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TEX43Q6ZNM6 134 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OOSP2Q86WS3 158 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TGIF2LYQ8IUE0 185 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 OR52E2Q8NGJ4 325 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TAS2R8Q9NYW2 309 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms